Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq67 143 2e-29
seq23 132 4e-26
>seq67
Length=2709248
Score = 143 bits (158), Expect = 2e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| |||||||||||| || ||| |||| || || ||
Sbjct 458928 GTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTG 458987
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||| ||||||||||| | ||||||||||||| ||| ||
Sbjct 458988 CTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 459047
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||||| | ||||||||||| ||| || |||||||||||
Sbjct 459048 CGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGT 459107
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
||| || || || || || |||||
Sbjct 459108 CAGGGTTTTGACGAAAATCTGCAT 459131
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || |||||||||||||| |||||||| || ||| |||| |||| |||
Sbjct 458695 ACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTCC 458754
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || ||||| || || || || || || | |||||||||||| |
Sbjct 458755 AGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTGA 458814
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | |||| ||| || |||| || || ||||||
Sbjct 458815 ATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTTG 458874
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || ||||| |||||
Sbjct 458875 CCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
>seq23
Length=7462253
Score = 132 bits (146), Expect = 4e-26
Identities = 158/212 (75%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||||||||||||||| |||||||||||| ||| ||| | || ||||| ||
Sbjct 7209974 GTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTG 7209915
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||| || || || |||| ||||| ||||| || || | |||||||||||| || ||
Sbjct 7209914 TTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGGATGCCCTCCTTGTCCTGGATCTT 7209856
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | |||| | ||||||||| | ||| || |||||||||||
Sbjct 7209855 GGACTTGACATTGTCGATCGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGT 7209796
Query 45313 CAGAGTCTTCACAAAGATTTGCATG-TTGCCT 45343
|| |||||||||||||| |||||| ||||||
Sbjct 7209795 GAGGGTCTTCACAAAGATCTGCATGATTGCCT 7209764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395074814801680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |