Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 8e-16 >seq23 Length=7462253 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 24829 ATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCG 24888 ||||||||||| ||||| || ||| | || ||||| || || ||| | || || || ||| Sbjct 7209769 ATCATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 7209828 Query 24889 AGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 ||||||| | || | ||| ||| || || | || || ||| | || | ||| Sbjct 7209829 AGCGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCT-GAC 7209887 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 ||||| || | || | |||||||||||| ||||| ||| | || || ||| ||| Sbjct 7209888 CAGCAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 7209947 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 | ||| ||||| ||| |||||| || ||||| | || |||| || ||| Sbjct 7209948 AACATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGT 7209998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418303592153600