Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1 509 1e-139
seq12 127 2e-24
seq67 95.1 1e-14
seq23 82.4 7e-11
>seq1
Length=15654088
Score = 509 bits (564), Expect = 1e-139
Identities = 1259/1891 (67%), Gaps = 45/1891 (2%)
Strand=Plus/Plus
Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164
|| ||| || || ||||| || | | ||||| | || |||||| || || ||||||||
Sbjct 14219667 CTGGTCGACGGTGAACTGGATAGGCTGGGCGGCAGCTTGGGTGCGCAGGTAGTACATGCC 14219726
Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224
|||||| || || | |||||| || || || || ||||| | || || | ||
Sbjct 14219727 CGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTTATCTTGCCCATGGTGGG 14219786
Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284
| | ||||| | |||| |||||| || ||||| || || || || || || ||
Sbjct 14219787 CTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAAGGCGCCGCGGTCAGCCGC 14219846
Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344
||| | | | || ||| ||| || ||||| || ||||||||||| || || | ||
Sbjct 14219847 CATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTATC 14219906
Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404
|| || |||| |||||| ||| ||| | | ||||| || || ||
Sbjct 14219907 CTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTCAT 14219966
Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAG--ATGACGGTTCACCACT 22462
| ||| |||||| || | || || || || | || ||| |||| || ||
Sbjct 14219967 GTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAGCCATG--GGTTGACGACC 14220024
Query 22463 TGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522
|| |||||||||| | ||||| || ||||| |||||||| ||| | || ||||| |
Sbjct 14220025 TGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCAC 14220084
Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582
|| ||||| ||||| ||||| | || ||||| ||||| ||||||| || ||||||
Sbjct 14220085 TCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACAAGCAGCGAG 14220144
Query 22583 TTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640
|| | || ||||||| |||| | | ||||||| | ||||||||| || || |
Sbjct 14220145 TTGCGCACACCGTGCTGCTTGA--TGTCCGCCTTGAGCGACTCCCAGTCCCAGAGCTCCG 14220202
Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCC 22698
||||| | || || |||||| ||||| |||| | ||| ||||| | || |||
Sbjct 14220203 ACGGCTTGACGTT---CCACATGTCGTACTGCAGGATGCCCTGCGACACA--GGCGAGCC 14220257
Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCG-GCAAGTTCGCAGCTCGCCTCCAACGCGC 22757
||||| || ||| | || | ||||| || || ||||| || || |||
Sbjct 14220258 CTCGTATGTCGAGTAGGTGCCCTGC-TCGCGCGCCAGCTCGCACGAGGCGGTCAGGGCGG 14220316
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCG---GCGGCGGCGACGCTTTCGT 22814
||| || || ||||| ||||| | |||||| | ||| || ||| || || ||
Sbjct 14220317 CGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGG-GAGACT--CGA 14220373
Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874
| |||| |||| | | ||| || || |||| |||||| ||||||| ||||| || |
Sbjct 14220374 AGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGATGGGCC 14220433
Query 22875 GGTTTTTCAGATTCGACACTTTT----GCCTCGGGCAAAGGATACCAATTCGAATCGATT 22930
||| ||| || || || ||||| | | || || | || |||||
Sbjct 14220434 GGTGGCGCAGGTTG----CTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACGTCGATG 14220489
Query 22931 GTTCTGTTCAAGTTTCTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989
| |||| ||| || | | || | | || | ||||| ||
Sbjct 14220490 ATCTTGTT-AAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGTCATA 14220548
Query 22990 AACGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGC 23046
||||| ||||| | ||||||| | || | ||| || || ||||| || ||
Sbjct 14220549 GGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGC 14220608
Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTAT 23103
|||||| || | || |||||| || || ||||| || || || ||| | ||
Sbjct 14220609 CACCTCATCGGGCG-CGAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGG---AT 14220664
Query 23104 CGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGG 23163
||||||| || |||||||||| || || ||||| || ||||| |||||| | ||
Sbjct 14220665 GGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGG 14220724
Query 23164 CGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACG 23223
|||| |||||| ||| | ||||| ||| || ||||| | || || | | ||
Sbjct 14220725 GTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTGAG-CG 14220783
Query 23224 TCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282
|| || ||| ||| || ||||||||||| |||||| || || || ||| | ||||
Sbjct 14220784 TCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCGT 14220843
Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342
| ||||| || ||||| || | | | || |||||||| |||| || || |
Sbjct 14220844 AGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCT 14220903
Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402
|||| || |||| || || || || |||||||| || ||| || ||||||||||| |
Sbjct 14220904 CAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGGA 14220963
Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462
|||||| |||||| |||||| || || | || || |||||||| || |||||||
Sbjct 14220964 TCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCACG 14221023
Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522
|||| || || | |||||| ||||| || | ||| ||||| ||||| |||||||||||||
Sbjct 14221024 GCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGG 14221083
Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582
||||||||||| | || | |||||| ||||||| |||||||| | |||| ||| |
Sbjct 14221084 CCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGG 14221143
Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642
| | || || | || || | | ||| | | || || || || ||| || |
Sbjct 14221144 CGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCCGGCCATCT 14221203
Query 23643 TCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGG 23702
| || ||||| || || ||| || ||||||||||| || ||||||||||| || ||
Sbjct 14221204 TGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCA 14221263
Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762
| |||||| ||| ||||| |||| || || | |||||| |||| ||| || || |
Sbjct 14221264 TGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGG 14221323
Query 23763 GGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAA 23822
| |||||| || ||||| ||||||| || |||||||| |||| || || |
Sbjct 14221324 GAGAGGCGTGGGTGAAGTACTTGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCGA 14221383
Query 23823 TGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCG 23882
||| || || || |||| ||||||||||| ||||||| || || | ||||||
Sbjct 14221384 TGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGGGGGCGCTCGACGA 14221443
Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942
| ||||| | |||| ||| || || || | || || || || ||||| || | ||
Sbjct 14221444 TCTTGCCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGAT 14221503
Query 23943 AGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
|||| ||||| || || | || ||||||||
Sbjct 14221504 AGTTGAAGTCCCGGTCATAGACGATGGCCGA 14221534
>seq12
Length=9596913
Score = 127 bits (140), Expect = 2e-24
Identities = 230/335 (69%), Gaps = 10/335 (3%)
Strand=Plus/Minus
Query 57960 ACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGC 58019
|| || ||| | |||| || || || |||||||| || ||||| ||||| || |
Sbjct 6218700 ACCTTTGCCTCGCGGCTCATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCC 6218641
Query 58020 TTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAAC 58079
||||| | || || ||| ||||||| |||||||||||||| ||||| || || ||||
Sbjct 6218640 TTTGCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAAC 6218581
Query 58080 GAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139
||| | || || || ||||||||||| || || || ||||| ||||| | | ||| |||
Sbjct 6218580 GAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCAC 6218521
Query 58140 ATTGTCAATAAACCGACGCGGGATCGC-----ATCTTGGACATTATCACCGAGGCGGTCG 58194
|| | ||||| | | | | || ||| ||| || ||| ||| || |||
Sbjct 6218520 AT----GAAGAACCGGCCCAGCA-AGCAAATGATCGAGGAGATCATCGTCGATGCTGTCA 6218466
Query 58195 CGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATG 58254
|||||| | ||||| | ||||| ||||| || || ||||||| ||||||
Sbjct 6218465 AGATCGAGCAAGAGTTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGA 6218406
Query 58255 ATTTGATGTCAAAGTACATTGAGTTTGTTGCCGAC 58289
| | ||| ||||||| ||||| || || |||
Sbjct 6218405 ACCTCATGAAGCAGTACATCGAGTTCGTGGCAGAC 6218371
>seq67
Length=2709248
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| |||| || ||||| ||||| |||| || ||| | ||
Sbjct 458676 CATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATC 458617
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGA-ATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
||| | | || | || ||| || | || ||| ||||| ||| | || || ||||
Sbjct 458616 CGATACGATTGATAACGT-AAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACC 458558
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
||||||| || || ||||| ||||| ||| |||| || || || || || |
Sbjct 458557 AGCAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACA 458498
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||||| || || |||||||| || || || || | ||| | |||||
Sbjct 458497 ACATTCAGAAGGAGTCGACTCTCCACCTAGTGCTGCGTCTGCGTGGCGG 458449
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || ||||| ||||| || |||||| | || || || | ||
Sbjct 459131 ATGCAGATTTTCGTCAAAACCCTGACGGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 459072
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| || | || |||||||||
Sbjct 459071 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 459012
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| || || ||| | || ||| | |||| | ||| || |||
Sbjct 459011 CAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGGACTCTTTCCGACTACAAC 458952
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || || || || || | || | |||||||
Sbjct 458951 ATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGCCTCCGTGGCGGTA 458903
Score = 82.4 bits (90), Expect = 7e-11
Identities = 132/190 (69%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274
|||| ||||| || |||||| |||| || || | ||||| | |||| | |||||
Sbjct 459337 TGACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGATACCATCGACAACGTCAAGT 459278
Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334
| || ||||||||| || | || |||||||||||||| || || ||||||||||
Sbjct 459277 CCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCTGGCA 459218
Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394
| || | || ||| ||| | || || ||||| |||||||| ||||| || |
Sbjct 459217 AGCAACTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAAGAGTCGACGCTGC 459158
Query 31395 ATCTGGTACT 31404
| || || ||
Sbjct 459157 ACCTCGTCCT 459148
>seq23
Length=7462253
Score = 82.4 bits (90), Expect = 7e-11
Identities = 115/160 (72%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||| |||||| || || || ||||| || || ||||| || |||||| | || || ||
Sbjct 7209767 CAATCATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGT 7209826
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|| ||||| |||| | ||||| | || ||||||||| ||| | || || |
Sbjct 7209827 CGAGCGACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCC-CCTG 7209885
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||||| || || || || ||||||||| |||| ||
Sbjct 7209886 ACCAGCAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGA 7209925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765954233600
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