Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 2e-13 >seq12 Length=9596913 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||||||||||||||| | | || | ||||| || || || || || ||||| ||||| Sbjct 6218551 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCC 6218610 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 ||||| || ||||| || ||||| || || | ||| |||||||| || || || || Sbjct 6218611 GCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGC 6218670 Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-----ATCCACTTTTGA 33770 ||||||||||| || | | | || | || || ||| |||||||| | Sbjct 6218671 GGCAAAGGCAATGAGCCGCGAGGC--AAAGGTCGACTTCTTGTCGGAAATCCACTTCAAA 6218728 Query 33771 GCCCAATCGGCCTTCTT 33787 ||||| ||||||||||| Sbjct 6218729 GCCCAGTCGGCCTTCTT 6218745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816970182400