Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=15654088 Score = 100 bits (110), Expect = 2e-16 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 33541 GTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TT 33599 |||||| || || |||| ||| ||| || ||| ||||||||||||| | ||| Sbjct 14101514 GTCAAGGTCCAGACGCGCCAGACGCGCCGTCCCGAGCTGGGCGACAAGTTCTCGTCGCGC 14101573 Query 33600 CACGGCCCAGAAGGGC-ACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGG 33658 ||||| ||| |||||| ||| |||||| || ||||||| ||||||||||||| || Sbjct 14101574 CACGG-CCAAAAGGGCGTCGT-CGGCATCATCGTCGACCAGGAGGACATGCCGTTCCAGG 14101631 Query 33659 CCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGG 33718 | ||| |||| || ||| | |||| |||||||| | |||||||| || ||||||| Sbjct 14101632 ACTCGGGCCTGGTGCCTGACATCATCATGAACCCGCACGGTTTCCCCTCCCGAATGACGG 14101691 Query 33719 T 33719 | Sbjct 14101692 T 14101692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233252672240