Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 2e-21
seq12 102 1e-16
>seq1
Length=15654088
Score = 118 bits (130), Expect = 2e-21
Identities = 406/628 (65%), Gaps = 14/628 (2%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
||||||||||| || | || ||| ||||| || |||| || ||||| | || |
Sbjct 14220828 TCGAACTCGTCGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTC 14220887
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | | || || || ||||| || || || || ||||| || || | ||
Sbjct 14220888 CAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAA 14220947
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
|| || | || | |||||| || || ||||| || ||||||||| | |
Sbjct 14220948 AGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAC 14221007
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| || | |||||||| |||| || ||||| | | || || || ||||| || |||
Sbjct 14221008 ACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCC 14221067
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||| | || ||||| || |||| | | ||| || | || || ||||||
Sbjct 14221068 TGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGAT 14221127
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGAC 80218
|| || ||||| |||| ||| ||| || |||| || || | |||| || |
Sbjct 14221128 GTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTG--AGGC 14221185
Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278
| || || || ||||| || ||||| | || || ||| | || || ||||| || |
Sbjct 14221186 CGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCAT 14221245
Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 80338
| ||||| || || |||||| | || || || |||| ||| | || |
Sbjct 14221246 CGATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGC 14221305
Query 80339 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398
| || || || | || ||||| ||||| || || | || |||| || |||||||
Sbjct 14221306 CGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTACTTGCTCGACATGAGGTTGTACG 14221365
Query 80399 TCT----CAATAGCT-GATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453
||| || ||| ||| | | ||| |||| || || ||||| ||||| |
Sbjct 14221366 TCTCGAGCACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACAGCGACGCGCATGAT 14221420
Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTG 80481
||||||||| || | || |||||||||
Sbjct 14221421 CATGTGCTGGGGGCGCTCGACGATCTTG 14221448
>seq12
Length=9596913
Score = 102 bits (112), Expect = 1e-16
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033
||||||||||||||| | | || || |||||||| || || || || ||||| |||||
Sbjct 6218551 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCC 6218610
Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093
||||| || ||||| || ||||| ||||| | || |||||||| || || || ||
Sbjct 6218611 GCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGC 6218670
Query 50094 GGCAAAGGCAA 50104
|||||||||||
Sbjct 6218671 GGCAAAGGCAA 6218681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268081731200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |