Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 158 2e-33
seq12 123 4e-23
>seq1
Length=15654088
Score = 158 bits (174), Expect = 2e-33
Identities = 383/576 (66%), Gaps = 3/576 (1%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||||| ||| ||| | ||||| ||||| | | | ||| | | | ||
Sbjct 14221138 ACCAACGGCACATCCAACGGCATCGTGCCCATGCTACGTGTTTTCAACAACACGGCCCGT 14221079
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| ||||| ||||| || || || ||||| | ||| |||| |||| || |||
Sbjct 14221078 TACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATCTGGAGCCGTGG 14221019
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986
||||| ||||| || || || |||| ||||||| ||| ||| || ||| ||
Sbjct 14221018 CACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGC 14220959
Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046
||| | ||| | || || || ||| | ||||| | ||||||||||| || | |
Sbjct 14220958 GCCCGCGACCTTTTCCTGGCCCTATGGATCCCAGACCTATTCATGAAGCGGGTTGAGAAG 14220899
Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106
||| |||||| || ||||||||| || || || || || | || |||| |||
Sbjct 14220898 AACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCTGGCCTAGCAGACTGCTACGGC 14220839
Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGT 97165
|| ||||| ||||| |||| ||||||| |||||| | || ||||| |
Sbjct 14220838 GACGAGTTCGAGGCTTTGTACGAAAAGTACGAGCGTGAGGGCAAGGGCCGCAAGACG-CT 14220780
Query 97166 CGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTA 97225
| | || | | | |||||| | |||||| | ||| ||| |||||||| | || |
Sbjct 14220779 CAAGGCGCAAAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTT 14220720
Query 97226 CATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAA 97285
||| || ||||| || | || ||||| |||||||| || |||||||||||
Sbjct 14220719 CATGCTGTACAAAGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCG 14220660
Query 97286 GGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
|||| || |||||||| || || || |||||| | | || || ||| ||| || ||
Sbjct 14220659 CAGCTCTAACCTGTGCACCGAGATCGTCGAGTAC-TCGCGCCCGATGAGGTGGCTGTGTG 14220601
Query 97346 CGTTCTGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381
| ||||| ||| | ||||| ||||||| ||
Sbjct 14220600 CAACCTGGCGTCGTTGGCGCTGCCGCAGTTTGTCGA 14220565
>seq12
Length=9596913
Score = 123 bits (136), Expect = 4e-23
Identities = 301/446 (67%), Gaps = 25/446 (6%)
Strand=Plus/Minus
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || |||||||| ||||| |||||||| ||| ||||| ||||||| |||||
Sbjct 6218679 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTG 6218620
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||||||||| || ||||| || || || | |||||| | || ||||| ||||||
Sbjct 6218619 AAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 6218560
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCCGAGTGC 125609
|| || ||| ||||||||| || || || || || | | || ||| ||
Sbjct 6218559 GGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACATGAAGAACCGGCCC---AGC 6218503
Query 125610 AGATCCAGCGAT-GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668
| | | | ||| || || ||||| || |||||| || | ||| || |||||
Sbjct 6218502 A-AGCAAATGATCGAGGAGATCATC------GT---CGATGCTGTCAAGATCGAGCAAGA 6218453
Query 125669 GTTTCTAACCGAATCCCTACC-GGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCG 125727
||| || ||||| |||| || || || || | |||||||||| || || |||
Sbjct 6218452 GTTCCTGACCGAGGCCCTGCCTTGTGCGC-TGCTCGGCATGAACTCGAACCTCATGAAGC 6218394
Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT---GATTGGCCGCAAGATTT 125784
||||||| ||||| |||||||| || || ||| | | || || |||| | |
Sbjct 6218393 AGTACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTCGGGAATG---ACAAGGTCT 6218337
Query 125785 ACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACT 125844
|| ||| || ||||| || |||||| | ||| || || | || ||||||||||
Sbjct 6218336 ACCGCGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGCAAGACCAACT 6218277
Query 125845 TTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| ||||| ||| || ||||||||
Sbjct 6218276 TCTTCGAAAAGCGCGTGGGCGAGTAC 6218251
Score = 111 bits (122), Expect = 2e-19
Identities = 201/290 (69%), Gaps = 13/290 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| |||||| ||||||| || ||||| | || ||| |||| ||
Sbjct 6219157 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACAGCTGAGGAGATCGACTTG 6219098
Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137
||||||||||| |||| ||| | || | || || || |||| | || || ||
Sbjct 6219097 TCCAAGGACCTCCACGACTGGAACAACAAGCTTAAC-GACGATGAGAAGTACTTCATCTC 6219039
Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197
|||||| | |||||||||||| |||| ||||||||||| || ||| || ||
Sbjct 6219038 GCACATCCTCGCCTTCTTTGCC-------ATGGCATCGTCAACGAGAACCTGGTGGAGCG 6218986
Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255
||| ||| | ||| | || |||| ||||| || || || || ||||||
Sbjct 6218985 CTTCAGCGGCGAG--GTCCAGGTCCCTGAGGCACGTTGCTTCTATGGGTTTCAGATCATG 6218928
Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|| |||||| | |||||||| | ||||| ||||| |||| |||||
Sbjct 6218927 ATGGAGAACATCCACTCGGAGACTTACTCGCTCCTGATCGACACCTACAT 6218878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058458940800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |