Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq12 132 4e-26 >seq12 Length=9596913 Score = 132 bits (146), Expect = 4e-26 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| || ||||| || | || |||||| || |||| ||| ||| || | | Sbjct 4563001 GCGCTCGATGACGAGCTGGGCGACCCGCTCGCCCTCCTCGACCTTGAAGTCGGCGTCGGC 4563060 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| |||| ||| || | |||||||||||||||||| || ||||||||||| Sbjct 4563061 GTGGTTGAAGAGCAGCACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCCGCGCC 4563120 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | |||||||||||||||| | || |||||||| ||||| || | |||||||| Sbjct 4563121 CGTGTCGATGAAGTGCTTGGCGGCGAGGCCGGACCGGGGCGCGATGCGGCCGT 4563173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430053980696960