Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq45 89.7 3e-13 >seq45 Length=5506958 Score = 89.7 bits (98), Expect = 3e-13 Identities = 143/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 25389 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAG 25448 || ||||| | |||||| | ||||||||| || ||| | || ||||| || | |||| Sbjct 4038716 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 4038657 Query 25449 ACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCC 25508 ||||| ||||| |||| |||| | | || || | || || ||| || Sbjct 4038656 ACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAGGCGTGGGCG 4038597 Query 25509 ATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCC 25568 | ||||| ||| || || ||||||| |||||||| ||||| || || | |||||||| Sbjct 4038596 AGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGGCCCATGTCG 4038537 Query 25569 CCCCGACCTCTGGTAGAGCTGACA 25592 | |||| |||||||||||| || Sbjct 4038536 CAG-GACCGCTGGTAGAGCTGGCA 4038514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137268365840