Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq67 104 2e-17
seq23 86.0 6e-12
>seq67
Length=2709248
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||| | || ||||| || | ||| ||||| || |||| |||||
Sbjct 458694 CACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTC 458753
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || ||||||| || | ||||||||| || || ||||| || ||||| |
Sbjct 458754 CAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTG 458813
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||| ||| | ||| ||||| | ||||| || | ||||||||| ||
Sbjct 458814 AATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTT 458873
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 458874 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
||| || | || |||| ||| | ||| | ||| || ||||| || | ||| || ||
Sbjct 458448 TCCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGA 458507
Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899
|| || | |||||||||||| || || | ||||| | | ||||| || |||||
Sbjct 458508 CAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGG 458567
Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959
|| || || || || | || || ||| ||| | | || || | |||||
Sbjct 458568 GATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGAC 458627
Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| | |||||||||||||||||| | || ||||| |||||||||||||
Sbjct 458628 TTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATGC 458677
>seq23
Length=7462253
Score = 86.0 bits (94), Expect = 6e-12
Identities = 139/196 (71%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876
||||| || | ||| || ||| || ||| | ||||||||||||||| || |||||
Sbjct 7209961 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAG 7209902
Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936
|| | | ||||| || || ||| | || || ||||| | || || | |||||| |
Sbjct 7209901 ATCAGGCGCTGCTGGTCAGGGGGA-TGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 7209843
Query 94937 CCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995
||| ||||| || | || || |||| ||||| || || || || || || |||||
Sbjct 7209842 TCGATCGTGTC-GCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 7209784
Query 94996 AAAGATCTGCATGCTT 95011
||||||||||||| ||
Sbjct 7209783 AAAGATCTGCATGATT 7209768
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290751708800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |