Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq67 104 2e-17 seq23 86.0 6e-12 >seq67 Length=2709248 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | || ||||| || | ||| ||||| || |||| ||||| Sbjct 458694 CACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTC 458753 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || ||||||| || | ||||||||| || || ||||| || ||||| | Sbjct 458754 CAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTG 458813 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || | ||| ||| | ||| ||||| | ||||| || | ||||||||| || Sbjct 458814 AATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTT 458873 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 458874 GCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 ||| || | || |||| ||| | ||| | ||| || ||||| || | ||| || || Sbjct 458448 TCCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGA 458507 Query 94840 CATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGG 94899 || || | |||||||||||| || || | ||||| | | ||||| || ||||| Sbjct 458508 CAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGG 458567 Query 94900 AATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGAC 94959 || || || || || | || || ||| ||| | | || || | ||||| Sbjct 458568 GATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGAC 458627 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||||||||||||| | || ||||| ||||||||||||| Sbjct 458628 TTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATGC 458677 >seq23 Length=7462253 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 94817 TCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876 ||||| || | ||| || ||| || ||| | ||||||||||||||| || ||||| Sbjct 7209961 TCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAG 7209902 Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936 || | | ||||| || || ||| | || || ||||| | || || | |||||| | Sbjct 7209901 ATCAGGCGCTGCTGGTCAGGGGGA-TGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 7209843 Query 94937 CCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995 ||| ||||| || | || || |||| ||||| || || || || || || ||||| Sbjct 7209842 TCGATCGTGTC-GCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 7209784 Query 94996 AAAGATCTGCATGCTT 95011 ||||||||||||| || Sbjct 7209783 AAAGATCTGCATGATT 7209768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290751708800