Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq45 105 1e-18
>seq45
Length=5506958
Score = 105 bits (116), Expect = 1e-18
Identities = 86/102 (84%), Gaps = 2/102 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| || |
Sbjct 1597433 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCCA 1597491
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| |||||||| ||||||||||| ||||||||| | ||||
Sbjct 1597492 TCCGCCGTCTGGCGCGTCGTGGTGGTGTCAAGCGTATTTCTG 1597533
Score = 89.7 bits (98), Expect = 8e-14
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| |||| ||||| |||||| || |||||||| || |
Sbjct 4629690 TGATCTACGAGGAGACACGTGGTGTTCTGAAGTCCTTCCTTGAGGGCGTTATCCGCGACG 4629749
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
|| || || ||||||||||| || | ||||||||||| || | || ||||||| |
Sbjct 4629750 CTGTCACATACACCGAGCACGCCAAGAGGAAGACTGTCACGTCACTTGACGTCGTCTACG 4629809
Query 16656 CATTGAAACGTCAAGGCCG 16674
| |||| || ||||||||
Sbjct 4629810 CCCTGAAGCGACAAGGCCG 4629828
Score = 84.2 bits (92), Expect = 3e-12
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588
|||| | || | || || |||| |||| ||| | ||| ||||||| || || |||
Sbjct 1597607 TCTGCAGTGATTTACGAGGAGACCCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCATC 1597666
Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648
| ||| || || ||| ||||||||||| || || ||||| |||||||| | ||| |
Sbjct 1597667 CGTGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGATGTT 1597726
Query 16649 GTCTATGCATTGAAACGTCAAGGCCG 16674
|||||||| |||| || || |||||
Sbjct 1597727 GTCTATGCCCTGAAGCGCCAGGGCCG 1597752
Score = 80.6 bits (88), Expect = 4e-11
Identities = 80/101 (79%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||| || || || |||||||| || ||
Sbjct 4629516 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATTACCAAGCCCGCAAT 4629574
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| ||||| || ||||||||||| || |||||| | ||||
Sbjct 4629575 TAGGCGTCTAGCCCGTCGTGGTGGTGTTAAGCGTATTTCTG 4629615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075126855440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |