Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 309 3e-79 seq67 136 4e-27 seq23 107 2e-18 seq12 100 3e-16 >seq1 Length=15654088 Score = 309 bits (342), Expect = 3e-79 Identities = 952/1448 (66%), Gaps = 52/1448 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||||||||| | ||| |||||| || | ||| |||||| |||| Sbjct 14220016 TTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGC 14220075 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| |||||||| || || | || | |||||||||||| |||||| Sbjct 14220076 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACA 14220135 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||| ||||||||| |||| |||| |||| ||||| Sbjct 14220136 AGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCCCAGTCCCAG 14220195 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT----CGCTGGCGGG 145293 ||| | |||| | |||| ||||||||||||||||| ||||||| | | |||| | Sbjct 14220196 AGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGACACAGGCGAG 14220255 Query 145294 GCTGCCTTGAAAG--GAACTGTAACTGCCCCAAGTTTTGGCG--AGCTCGCAACTCGCCT 145349 ||| | | | || ||| ||||| | | ||| |||||||| || Sbjct 14220256 ---CCCTCGTATGTCGA---GTAGGTGCCC--TGCTCGCGCGCCAGCTCGCACGAGGCGG 14220307 Query 145350 CCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGC-TTCATCG 145408 ||| ||| || || || ||||| || ||| |||||||| |||| | ||| Sbjct 14220308 TCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGC----TCGCGAGCCTCG 14220363 Query 145409 ---CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACG 145465 |||| | |||| ||||||| || || |||||||| || ||||| | || | | Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423 Query 145466 CCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACG 145524 ||||||||||| || || |||||| | | ||| || || || || | | | || Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGAC- 14220482 Query 145525 GTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAA 145584 |||||| || || || | || || || || |||| || | | ||| ||| || Sbjct 14220483 GTCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAA 14220542 Query 145585 GTCAAACCGAGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTAC 145643 |||| | |||||| | | ||| | || | | || | |||||||| || | Sbjct 14220543 GTCATAGGCGCCCTCGTTGTAGTCGACA-AACTGCGGCAGCGCCAACGACGCCAGGTTGC 14220601 Query 145644 AAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTAC 145700 | || ||| ||| |||| || ||| | |||||||||| ||||| || ||| | Sbjct 14220602 ACACAGCCACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC 14220660 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||||| ||||| || | ||| || || || | |||||| ||| ||||| |||| Sbjct 14220661 ---GGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCA 14220717 Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCAC 145820 || | || ||||||||| ||| | ||| | ||| | || | ||||| Sbjct 14220718 TGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCT 14220777 Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 | | || || |||||| ||||| || ||| | |||| ||| || Sbjct 14220778 TGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGT 14220837 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 |||||||| || | ||||| || |||| |||||| ||||| |||| ||| |||||| Sbjct 14220838 CGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGT 14220897 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000 | | || |||| ||| || | ||||| | ||| || || | | |||||| | Sbjct 14220898 TCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGG 14220957 Query 146001 CTTTGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGC 146058 | | ||||| || ||| | || || | || | ||| | | ||| || Sbjct 14220958 CGCGGATCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCGAGGA-ACTCGAACACGTCGGC 14221015 Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCAC 146115 ||||||||| || | ||||| ||| | ||| || || |||||||||||||| || Sbjct 14221016 GTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGAC 14221075 Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175 || ||| || ||||||| || || || | ||||||| ||| |||| ||| | |||||| Sbjct 14221076 GTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTT 14221135 Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235 || | || || ||| || ||| | || || | ||| | ||||| |||||| Sbjct 14221136 GGTGCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCC 14221195 Query 146236 GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295 | | |||||| || ||| ||| ||| || |||||||| || || ||||| || Sbjct 14221196 GGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTC 14221255 Query 146296 G--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353 | |||| ||| ||| ||| |||||||| ||| ||| ||| ||||| || || | Sbjct 14221256 GTCCTTC--ATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTG 14221313 Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCG 146410 || | || || ||||| || || || |||| ||| | ||||| ||| Sbjct 14221314 AAGAGAGTGGGAGAGGCGTGGGTGAAGTACTT---GCTCGACATGAGGTTGTACGTCTCG 14221370 Query 146411 ATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGG 146470 | || | |||| |||||| ||||| | |||||||||||||| |||||| ||| Sbjct 14221371 AGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGG 14221430 Query 146471 GGCCGCTC 146478 || ||||| Sbjct 14221431 GGGCGCTC 14221438 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || || || ||||| ||||||||||| ||| | | Sbjct 11956322 CCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAA 11956381 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||| |||||||| || || ||||| ||| || ||| | | | Sbjct 11956382 TGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 11956441 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | || | ||| || || || || || || |||| Sbjct 11956442 CGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGA 11956501 Query 131225 A 131225 | Sbjct 11956502 A 11956502 >seq67 Length=2709248 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||||||||| || | ||||||||||| ||||||||||| || | Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| | |||||||||||||||||| Sbjct 458509 AAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 458568 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||| | | || | ||||||| || |||| Sbjct 458569 ATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACT 458628 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | |||||| || || | || || ||||| ||||||||| Sbjct 458629 TCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||| ||| ||||| || || | ||| |||||| || ||||||||||| Sbjct 458676 GCCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGA 458735 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| || |||| ||||| ||||| ||||| || Sbjct 458736 CAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGG 458795 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||| | | || | || || | ||||||| Sbjct 458796 GATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGAC 458855 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 458856 TTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||| | || || |||||| |||||||| || ||| | Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||||||||||| |||||||| || || ||||| || ||| ||||| | Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATT 459059 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||| | || | ||| | ||| || || || || ||||| || Sbjct 459060 GTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGAC 459119 Query 131223 GAAAATCTGCAT 131234 |||||||||||| Sbjct 459120 GAAAATCTGCAT 459131 Score = 100 bits (110), Expect = 3e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 |||||||| ||||| |||||||| || | ||| || |||||| || |||||||| Sbjct 459163 GTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGTTGCTTGCCA 459222 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||||||||||| ||||||||||| || ||||| ||| || |||| Sbjct 459223 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 459282 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | ||||||| ||||| | |||| ||| | ||| || || || Sbjct 459283 ACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 459335 >seq23 Length=7462253 Score = 107 bits (118), Expect = 2e-18 Identities = 162/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||||| |||| || |||||| || |||||||| ||| | Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||| ||||| || |||| | ||||||||||| || ||| Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGG 7209879 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACC 7209819 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || || || |||||||||| Sbjct 7209818 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGA 7209770 >seq12 Length=9596913 Score = 100 bits (110), Expect = 3e-16 Identities = 336/515 (65%), Gaps = 15/515 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | || ||||| |||||||||| |||||||||| | || | |||| Sbjct 6218757 CCATGCATCCGTAAGAAGGCCGACTGGGCTTTGAAGTGGATTTCCGACAAGAAGTCGACC 6218698 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 || ||| ||| | | |||||||| || ||||| |||| || || ||| Sbjct 6218697 TTTGCCTCGCGGCTCATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 6218638 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 ||| ||||||| | | || | ||| | ||||| ||||| || || ||||||| Sbjct 6218637 GCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAG 6218578 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTG---TCTCTACTATAACACT 46323 || || || || |||||||| ||||| ||||||||||| || ||||| || ||| | Sbjct 6218577 CTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACA-T 6218519 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | | | | ||| || | | || | || ||| || || || || Sbjct 6218518 GAAGAACCGGCCCAGCAAGCAAATG--ATCGAGGAGATCATCGTC---GATGCTGTCAAG 6218464 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443 || ||| | ||||| | || | || ||||| ||| ||||| ||||||||| | | Sbjct 6218463 ATCGAGCAAGAGTTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGAAC 6218404 Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCA--G 46500 ||| | ||||||||||| || || ||||| || || || ||| || | | Sbjct 6218403 CTCATGAAGCAGTACATCGAGTTCGTGGCAGACCGCCTCCTGGT--TGCTCTCGGGAATG 6218346 Query 46501 CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560 | ||| | | ||| ||| || || || || ||| | |||||||| |||| ||| Sbjct 6218345 AC-AAGGTCTACCGCGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGC 6218287 Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || |||||||||||||| |||||||| Sbjct 6218286 AAGACCAACTTCTTCGAAAAGCGCGTGGGCGAGTA 6218252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012327987200