Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1 309 3e-79
seq67 136 4e-27
seq23 107 2e-18
seq12 100 3e-16
>seq1
Length=15654088
Score = 309 bits (342), Expect = 3e-79
Identities = 952/1448 (66%), Gaps = 52/1448 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| ||||||||||| | ||| |||||| || | ||| |||||| ||||
Sbjct 14220016 TTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGC 14220075
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | |||||||||||| ||||||
Sbjct 14220076 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACA 14220135
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| ||||||| ||||||||| |||| |||| |||| |||||
Sbjct 14220136 AGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCCCAGTCCCAG 14220195
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT----CGCTGGCGGG 145293
||| | |||| | |||| ||||||||||||||||| ||||||| | | |||| |
Sbjct 14220196 AGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGACACAGGCGAG 14220255
Query 145294 GCTGCCTTGAAAG--GAACTGTAACTGCCCCAAGTTTTGGCG--AGCTCGCAACTCGCCT 145349
||| | | | || ||| ||||| | | ||| |||||||| ||
Sbjct 14220256 ---CCCTCGTATGTCGA---GTAGGTGCCC--TGCTCGCGCGCCAGCTCGCACGAGGCGG 14220307
Query 145350 CCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGC-TTCATCG 145408
||| ||| || || || ||||| || ||| |||||||| |||| | |||
Sbjct 14220308 TCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGC----TCGCGAGCCTCG 14220363
Query 145409 ---CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACG 145465
|||| | |||| ||||||| || || |||||||| || ||||| | || | |
Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423
Query 145466 CCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA-TCGATTACG 145524
||||||||||| || || |||||| | | ||| || || || || | | | ||
Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGAC- 14220482
Query 145525 GTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAA 145584
|||||| || || || | || || || || |||| || | | ||| ||| ||
Sbjct 14220483 GTCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAA 14220542
Query 145585 GTCAAACCGAGCCTCGTCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTAC 145643
|||| | |||||| | | ||| | || | | || | |||||||| || |
Sbjct 14220543 GTCATAGGCGCCCTCGTTGTAGTCGACA-AACTGCGGCAGCGCCAACGACGCCAGGTTGC 14220601
Query 145644 AAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTAC 145700
| || ||| ||| |||| || ||| | |||||||||| ||||| || ||| |
Sbjct 14220602 ACACAGCCACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC 14220660
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
|||||| ||||| || | ||| || || || | |||||| ||| ||||| ||||
Sbjct 14220661 ---GGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCA 14220717
Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCAC 145820
|| | || ||||||||| ||| | ||| | ||| | || | |||||
Sbjct 14220718 TGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCT 14220777
Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880
| | || || |||||| ||||| || ||| | |||| ||| ||
Sbjct 14220778 TGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGT 14220837
Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940
|||||||| || | ||||| || |||| |||||| ||||| |||| ||| ||||||
Sbjct 14220838 CGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGT 14220897
Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCG 146000
| | || |||| ||| || | ||||| | ||| || || | | |||||| |
Sbjct 14220898 TCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGG 14220957
Query 146001 CTTTGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACT-ATAGATGTCCGC 146058
| | ||||| || ||| | || || | || | ||| | | ||| ||
Sbjct 14220958 CGCGGATCTCCTCCTTGCCGTGGTTCTTGC-GCAGGTCGAGGA-ACTCGAACACGTCGGC 14221015
Query 146059 GTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCAC 146115
||||||||| || | ||||| ||| | ||| || || |||||||||||||| ||
Sbjct 14221016 GTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGAC 14221075
Query 146116 GTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTT 146175
|| ||| || ||||||| || || || | ||||||| ||| |||| ||| | ||||||
Sbjct 14221076 GTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTT 14221135
Query 146176 CGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC 146235
|| | || || ||| || ||| | || || | ||| | ||||| ||||||
Sbjct 14221136 GGTGCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCC 14221195
Query 146236 GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
| | |||||| || ||| ||| ||| || |||||||| || || ||||| ||
Sbjct 14221196 GGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTC 14221255
Query 146296 G--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353
| |||| ||| ||| ||| |||||||| ||| ||| ||| ||||| || || |
Sbjct 14221256 GTCCTTC--ATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTG 14221313
Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG---ATACGTTTCG 146410
|| | || || ||||| || || || |||| ||| | ||||| |||
Sbjct 14221314 AAGAGAGTGGGAGAGGCGTGGGTGAAGTACTT---GCTCGACATGAGGTTGTACGTCTCG 14221370
Query 146411 ATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGG 146470
| || | |||| |||||| ||||| | |||||||||||||| |||||| |||
Sbjct 14221371 AGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGG 14221430
Query 146471 GGCCGCTC 146478
|| |||||
Sbjct 14221431 GGGCGCTC 14221438
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || || || ||||| ||||||||||| ||| | |
Sbjct 11956322 CCTTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAA 11956381
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||| |||||||| || || ||||| ||| || ||| | | |
Sbjct 11956382 TGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGT 11956441
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || | |||||||| || | || | ||| || || || || || || ||||
Sbjct 11956442 CGATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGA 11956501
Query 131225 A 131225
|
Sbjct 11956502 A 11956502
>seq67
Length=2709248
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| ||||||||||| || | ||||||||||| ||||||||||| || |
Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| ||||||||||| ||| |||| | ||||||||||||||||||
Sbjct 458509 AAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 458568
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||| | | || | ||||||| || ||||
Sbjct 458569 ATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACT 458628
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| || | |||||| || || | || || ||||| |||||||||
Sbjct 458629 TCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| ||| ||||| || || | ||| |||||| || |||||||||||
Sbjct 458676 GCCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGA 458735
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| || |||| ||||| ||||| ||||| ||
Sbjct 458736 CAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGG 458795
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||| | | || | || || | |||||||
Sbjct 458796 GATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGAC 458855
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 458856 TTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|||||| || |||||||| ||| | || || |||||| |||||||| || ||| |
Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
||| | ||||||||||| |||||||| || || ||||| || ||| ||||| |
Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATT 459059
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || || | ||||| | || | ||| | ||| || || || || ||||| ||
Sbjct 459060 GTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGAC 459119
Query 131223 GAAAATCTGCAT 131234
||||||||||||
Sbjct 459120 GAAAATCTGCAT 459131
Score = 100 bits (110), Expect = 3e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|||||||| ||||| |||||||| || | ||| || |||||| || ||||||||
Sbjct 459163 GTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGTTGCTTGCCA 459222
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| |||| | ||||||||||| ||||||||||| || ||||| ||| || ||||
Sbjct 459223 GCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 459282
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210
| | || | ||||||| ||||| | |||| ||| | ||| || || ||
Sbjct 459283 ACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGT 459335
>seq23
Length=7462253
Score = 107 bits (118), Expect = 2e-18
Identities = 162/229 (71%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||||||||| |||| || |||||| || |||||||| ||| |
Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||| ||||| || |||| | ||||||||||| || |||
Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGG 7209879
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || ||| | ||||| |
Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACC 7209819
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || || || ||||||||||
Sbjct 7209818 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGA 7209770
>seq12
Length=9596913
Score = 100 bits (110), Expect = 3e-16
Identities = 336/515 (65%), Gaps = 15/515 (3%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | || ||||| |||||||||| |||||||||| | || | ||||
Sbjct 6218757 CCATGCATCCGTAAGAAGGCCGACTGGGCTTTGAAGTGGATTTCCGACAAGAAGTCGACC 6218698
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|| ||| ||| | | |||||||| || ||||| |||| || || |||
Sbjct 6218697 TTTGCCTCGCGGCTCATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT 6218638
Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266
||| ||||||| | | || | ||| | ||||| ||||| || || |||||||
Sbjct 6218637 GCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAG 6218578
Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTG---TCTCTACTATAACACT 46323
|| || || || |||||||| ||||| ||||||||||| || ||||| || ||| |
Sbjct 6218577 CTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACA-T 6218519
Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383
| | | | ||| || | | || | || ||| || || || ||
Sbjct 6218518 GAAGAACCGGCCCAGCAAGCAAATG--ATCGAGGAGATCATCGTC---GATGCTGTCAAG 6218464
Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAG 46443
|| ||| | ||||| | || | || ||||| ||| ||||| ||||||||| | |
Sbjct 6218463 ATCGAGCAAGAGTTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGAAC 6218404
Query 46444 TCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCA--G 46500
||| | ||||||||||| || || ||||| || || || ||| || | |
Sbjct 6218403 CTCATGAAGCAGTACATCGAGTTCGTGGCAGACCGCCTCCTGGT--TGCTCTCGGGAATG 6218346
Query 46501 CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGC 46560
| ||| | | ||| ||| || || || || ||| | |||||||| |||| |||
Sbjct 6218345 AC-AAGGTCTACCGCGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGC 6218287
Query 46561 AAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|| || || || |||||||||||||| ||||||||
Sbjct 6218286 AAGACCAACTTCTTCGAAAAGCGCGTGGGCGAGTA 6218252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012327987200
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