Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq45 84.2 3e-11 >seq45 Length=5506958 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATT 15109 ||| |||| || ||||||||| ||| || | || ||||| || ||| | | Sbjct 2602438 CCCCAGATCGGAGACAAGTTTGCCTCGCGTCACGGTCAGAAGGGTACTATCGGTGTTACG 2602497 Query 15110 TTCCCCCAGGAAGACATGCCCTTTACCGCGTCA-GGCATGACGCCCGACATTATCATCAA 15168 | || ||| || |||||||| ||||| ||| | ||||| ||||| ||||| |||||||| Sbjct 2602498 TACCGCCATGAGGACATGCCTTTTAC-GCGAGAAGGCATCACGCCAGACATCATCATCAA 2602556 Query 15169 CCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||| || ||| |||||||| ||||| || Sbjct 2602557 CCCCCACGCCATTCCGTCCCGTATGACAAT 2602586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391388608000