Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq12 87.8 2e-12
>seq12
Length=9596913
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/197 (70%), Gaps = 7/197 (4%)
Strand=Plus/Plus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| ||||||||||| | | || | |||||||| || || || || ||||| |||||
Sbjct 6218551 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCATCAGGCC 6218610
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
||||| || ||||| || ||||| ||||| | || ||||| || || || || ||
Sbjct 6218611 GCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGC 6218670
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-----ATCCACTTTTGA 32849
||||||||||| || | | | || | || || ||| |||||||| |
Sbjct 6218671 GGCAAAGGCAATGAGCCGCGAGGC--AAAGGTCGACTTCTTGTCGGAAATCCACTTCAAA 6218728
Query 32850 GCCCAATCGGCCTTCTT 32866
||||| |||||||||||
Sbjct 6218729 GCCCAGTCGGCCTTCTT 6218745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631366368000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |