Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq23 111 1e-19
seq67 104 2e-17
>seq23
Length=7462253
Score = 111 bits (122), Expect = 1e-19
Identities = 162/228 (71%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || || || |||| ||||| ||||| | | |
Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| || |||| || || || ||||||||||| | ||| || || ||
Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCA-TCCCCCTGACCAG 7209890
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || ||||| ||||||||| | |||||| |||||| | ||||| ||||||
Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || ||| |||| |||| |||| |||| || |||
Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGT 7209998
>seq67
Length=2709248
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || ||||| || | |
Sbjct 458903 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCA 458844
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || |||||||||||||||||||| || || |||||
Sbjct 458843 GACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAG 458784
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| ||||| ||| | ||||| ||||| | || |||||||||
Sbjct 458783 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACAAC 458724
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||| | || || || | || ||||||| ||
Sbjct 458723 ATCCAGAAGGAGAGCACCCTCCACTTGGTGCTTCGTCTGCGCGGTGG 458677
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || ||||| |||| || ||||| ||| | ||
Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | || || || || || |||||||| || || || || ||
Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| ||| | |||||| ||| ||| | || || ||||||
Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||| || || || || | || |||| |||| |||| || ||
Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCTGCGTCTGCGTGGCGG 458449
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || ||||| | || || || || |||| | || ||||| | |
Sbjct 459131 ATGCAGATTTTCGTCAAAACCCTGACGGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 459072
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || ||||| |||||||||||||| || ||||| ||
Sbjct 459071 GACACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAG 459012
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || ||| | ||||| || || | ||||| ||||||
Sbjct 459011 CAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGGACTCTTTCCGACTACAAC 458952
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 458951 ATCCAGAAGGA 458941
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || ||||| | |||||||| | ||| | ||||
Sbjct 459335 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGATACCATCGACAACGTCAAGTCC 459276
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| || || || || || || || |||||
Sbjct 459275 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAG 459216
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | ||||| ||| ||| |||| || |||||||| |||||||| || ||
Sbjct 459215 CAACTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAAGAGTCGAC 459163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727590765200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |