Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq67 100 2e-16
seq1 84.2 2e-11
>seq67
Length=2709248
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|||||||| || | || |||| || | || || || || ||||||||||| || |
Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| ||||| ||| || || || || || ||| |||| || ||||| |||||||||||
Sbjct 458509 AAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 458568
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
||||| || || || ||||| |||| | |||| || |||| ||||||||
Sbjct 458569 ATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACT 458628
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| | || | ||||| || |||| || || || || |||||||||
Sbjct 458629 TCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||| | ||| ||| || || || || || || ||| ||
Sbjct 458941 TCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAAG 459000
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||| ||||| ||||| || || || ||||| |||||| || | |
Sbjct 459001 ATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTG 459060
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | |||||| | || || || |||| ||| | || ||||| ||||| ||||| ||
Sbjct 459061 TCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGACG 459120
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 459121 AAAATCTGCAT 459131
>seq1
Length=15654088
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| ||| || ||| || ||| ||||| || || |||||| | |||
Sbjct 11956324 TTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATG 11956383
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|||||||| ||||| ||||| ||||| || ||||| ||||| || | | ||
Sbjct 11956384 AGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 11956443
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
| ||||| | ||| ||||| |||| || | || ||||| || || || || || ||
Sbjct 11956444 ATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGAA 11956502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420133990368960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |