Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1 706 0.0
seq12 242 7e-59
>seq1
Length=15654088
Score = 706 bits (782), Expect = 0.0
Identities = 1465/2146 (68%), Gaps = 80/2146 (4%)
Strand=Plus/Plus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||||| || | |||| || | ||| | ||||||||||||||| ||||||
Sbjct 14219674 ACGGTGAACTGGATAGGCTGGGCGGCAGCTTGGGTGCGCAGGTAGTACATGCCCGTCTTG 14219733
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| || |||| || || |||||| | ||| | ||| ||| || |||
Sbjct 14219734 AGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTTATCTTGCCCATGGTGGGCT----- 14219788
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915
||| || || |||||| ||||| ||||||| ||||| |||| || ||
Sbjct 14219789 -------CGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAAGG-CGCCGCGGTC 14219840
Query 243916 TGCGGCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974
|| ||||| || || ||| | ||| || ||||| | |||||||||| | | |||
Sbjct 14219841 AGCCGCCATCTGGACGACGGTGCG-CTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCT 14219899
Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034
|| | |||||||| | |||||||||| | ||||| | | |||||| ||
Sbjct 14219900 TGGTATCCTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGT 14219959
Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGACCAGGTGCCT---G 244090
| |||||| ||| ||||| ||| |||| | |||| ||| |||| ||| |
Sbjct 14219960 TCTTCATGTTGTCGGACCACAAGCC-AAGCTCGACCAGGTCCTT---CAGGAGCCATGGG 14220015
Query 244091 TTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGC 244150
|| || ||||| ||||| || | |||||||| |||||||||| |||| || |||
Sbjct 14220016 TTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGC 14220075
Query 244151 TCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACC 244210
|||| || ||| |||||||||| ||||||| |||||| || || |||||||||| |||
Sbjct 14220076 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACA 14220135
Query 244211 AGCAGACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTCTGAGCTCGTTCCAGTCCCA 244269
||||| ||| | ||| |||||| || |||| | | | ||||| | |||||||||
Sbjct 14220136 AGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCT-TGAGCGACTCCCAGTCCCA 14220194
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| |||| || | |||| | ||||||||| ||||||| | ||||
Sbjct 14220195 GAGCTCCGA--------CG-GCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGA 14220245
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGT-CGCGCTGGGCCAGCTTACAGCTCT 244388
|| || ||||||||| |||| ||||| || | | ||| | ||||||| ||
Sbjct 14220246 CACAGGCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGC-GCGCCAGCTCGCACGAGG 14220304
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448
|| |||||||||| |||||||||||| |||||| |||||| | ||||| |||| |
Sbjct 14220305 CGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGG 14220364
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| |||||| | || || | | |||| | |||||||| ||||||||||| | ||
Sbjct 14220365 GAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGC 14220424
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
||||||| | ||| ||| |||| | || || | || ||||| ||||| |||
Sbjct 14220425 CGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACGT 14220484
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | |||||| || || || || | || || ||| |||| | | ||||
Sbjct 14220485 CGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGT 14220544
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688
| || || ||||| | || || ||||||| || || | |
Sbjct 14220545 CATAGGCGC------CCTCG----TTGTAGTCG--ACAAACTGCGGCAGCGCCAACGACG 14220592
Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748
|||||||||| || |||||||| || | | | ||||| ||| ||||||||||| ||||
Sbjct 14220593 CCAGGTTGCACACAGCCACCTCATCGG-GCGCGAGTACTCGACGATCTCGGTGCACAGGT 14220651
Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808
|| || |||||||||||||| || || ||| |||| ||||||| ||| ||||
Sbjct 14220652 TAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGT 14220711
Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868
| ||||||||||| || |||||| |||||| |||||| | | ||| || |
Sbjct 14220712 ACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTT 14220771
Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928
||||||| |||| |||| |||||||||| |||||| ||||| |||||||
Sbjct 14220772 GCGCCTTGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGA 14220831
Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988
||||| ||| || || ||||||| |||||| ||||||||||| |||| |
Sbjct 14220832 ACTCGTCGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGT 14220891
Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048
||||| | || |||| || |||||| ||||| |||||||| |||||| |||| ||||
Sbjct 14220892 CGCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGT 14220951
Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108
| | || | ||| ||| ||| |||||| | ||| || | || || || ||||
Sbjct 14220952 CGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGT 14221011
Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168
|| ||||||| ||||||| |||| || | ||||||||| ||||||||||| |||||||
Sbjct 14221012 CGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGT 14221071
Query 245169 CCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227
| || | | || | |||||| | || || | ||||| |||||||| || |
Sbjct 14221072 CGACGTAACGGGCCGTG-TTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTG 14221130
Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCC 245283
||||||||||| |||||||| |||| || | | || ||| | |||| || |||
Sbjct 14221131 CCGTTGGTGCCGGCGATGTAGGAGCCCGTGGC---GCGGATGC-GGTGGATATTGAGGCC 14221186
Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343
| |||||||| ||||||||| | ||| ||| | |||| |||||| || || ||
Sbjct 14221187 GATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATC 14221246
Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403
|||||||| |||||||| || ||| ||||| || |||||||||| || ||| |||
Sbjct 14221247 GATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCC 14221306
Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGT 245463
| |||||| |||||||| ||||||||| ||||| |||||| | || ||||||
Sbjct 14221307 GGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTACTTGCTCGACATGAGGTTGTACGT 14221366
Query 245464 CTGGAGCA-GAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGT 245522
|| ||||| | || |||||||||||||| ||| | ||| | ||||| |||
Sbjct 14221367 CTCGAGCACGCGC-TCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGT 14221425
Query 245523 GCT-GGGGCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCG 245579
||| |||||| || |||| || ||| | |||||||| ||| |||||||| || |
Sbjct 14221426 GCTGGGGGCGCTCGACGATCTTGCCGTCGAG---CTTGAGCAGGTACGAGCGCTCCAGGG 14221482
Query 245580 TCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAGTC 245639
||||||| ||||||||| ||| ||||| || | || ||| | ||||| |
Sbjct 14221483 TCTTGAAGCCAAAGTACTGATAGTTGAAGTCCCGGTCATAGACGATGGCCGAGTCGA-AC 14221541
Query 245640 TC-TCGGCGTGCTTCTGACTGACCTCGTAAAACTTTTGCGCTATGAGGGGAG---CCCTG 245695
|| || ||| | | | ||||| | ||| || || | ||| | ||||
Sbjct 14221542 TCGTCCTTGTGGCGCATAACGCAGTCGTACGTTTCTTGGGCGATCATGGGCGACAGCCTG 14221601
Query 245696 AGCCCGGTGTCCGGATTGACGT--TGAACCAGAGCCTCTTGCACACCTCCGAGAACTTGG 245753
||| | | || ||||||| || | ||| | | || || ||| ||||||||
Sbjct 14221602 ---CCGTTCTTGGGGTTGACGTAGTGGAACAG-GTCGCTGACA-ACCGACGAGAACTGCT 14221656
Query 245754 GGCTGGTGAGCTTATGCAGGTTGGTGACTGCTATGCGCGCCGCCAACTTGCTGTAGTCGG 245813
|||| |||| |||||||||| || || |||||||| |||| || ||||||||
Sbjct 14221657 TCTTGGTCTGCTTGTGCAGGTTGGACACGGCAATGCGCGCGGCCAGGATGGCGTAGTCGG 14221716
Query 245814 GGTGAGTGGTGGTCATGTTGGAGGCCGTGTGGGCCAGCAGCTCGTC 245859
|||||||| |||||||| | |||||| | ||| ||| |||||
Sbjct 14221717 GGTGAGTGACGGTCATGTACGCGGCCGTTTCGGCGGCCAGGTCGTC 14221762
>seq12
Length=9596913
Score = 242 bits (268), Expect = 7e-59
Identities = 370/519 (71%), Gaps = 15/519 (3%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT---CGAGAGTCCCGACG-C 42688
|| |||||| |||||||| |||||||| | || ||||| ||| | || | |
Sbjct 6218757 CCATGCATCCGTAAGAAGGCCGACTGGGCTTTGAAGTGGATTTCCGACAA----GAAGTC 6218702
Query 42689 AACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGC 42748
|| || | | | |||| | |||||| ||||||| ||||| ||||||||| || ||
Sbjct 6218701 GACCTTTGCCTCGCGGCTCATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGC 6218642
Query 42749 CTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAA 42808
||| ||||||||||||||||| ||| || | |||||| || || |||||||| ||
Sbjct 6218641 CTTTGCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAA 6218582
Query 42809 CGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAG 42868
||| |||||| | |||||||| ||||| | ||||||||||||||| || |||||
Sbjct 6218581 CGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTC--- 6218525
Query 42869 CCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928
|||| | | | || |||| ||| | | || || |||||| || || || |
Sbjct 6218524 CCACATGAAGAACCGGCCCAGCAAGCAAATGATCGAGGAGATCATCGTCGATGCTGTCAA 6218465
Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACG 42987
||||||| | |||||||| || || | ||||| ||| | ||| |||||||||||
Sbjct 6218464 GATCGAGCAAGAGTTCCTGACCGAGGCCCTGCCTTGTG-CGCTGCTCGGCATGAACTCGA 6218406
Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTC 43046
|||||||| |||||||| ||| ||| || |||| ||||| || | ||| |
Sbjct 6218405 ACCTCATGAAGCAGTACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTCGGGAATG 6218346
Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106
| | ||||| | | | |||||||||||| |||||||||||||| ||| |||
Sbjct 6218345 A-CAAGGTCTACCGCGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGC 6218287
Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
||||||||||| ||||| |||||||| | ||| ||||||
Sbjct 6218286 AAGACCAACTTCTTCGAAAAGCGCGTGGGCGAGTACCAG 6218248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338255660800
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