Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq67 122 2e-22
>seq67
Length=2709248
Score = 122 bits (134), Expect = 2e-22
Identities = 167/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| |||||||| || | ||| || | || | ||||| || || ||||| || || |
Sbjct 458673 CATG-CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAAT 458731
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| ||||| || | || || || || ||||||| ||| || |||
Sbjct 458732 CCGACAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCG 458791
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || || || || |||| |||||||| || || | || || |
Sbjct 458792 GGGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACT 458851
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| ||||| |||||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 458852 CGACTTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 109 bits (120), Expect = 1e-18
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || ||||| || | ||| ||||||||||| || ||||| | |
Sbjct 459133 CCTCCACGGAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAG 459192
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | ||| || || |||||||| || ||||| || |||
Sbjct 459193 AGGGTCCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 459252
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||| || || |||||||| || | || ||||| || || | |||| || || ||
Sbjct 459253 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACC 459312
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451
||||| ||||| ||||| || ||||
Sbjct 459313 TCGAGGGTGATGGTCTTGCCCGTCA 459337
Score = 107 bits (118), Expect = 5e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | || ||||| || | ||||| || || ||||| || |||||||
Sbjct 458905 CCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 458964
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | || || || ||||||||||| ||||| || |||
Sbjct 458965 AGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 459024
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || |||| || || || || || | || || || ||
Sbjct 459025 ATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 459084
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||||| ||||| || ||||| || |||||||| ||||||||
Sbjct 459085 TCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Score = 105 bits (116), Expect = 2e-17
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||| | | || || || || || | || || || ||||||
Sbjct 458485 TCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAG 458544
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401
||||| ||||| || ||||| || || ||||||||||| || ||| || |||||
Sbjct 458545 ATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTT-GCTCTTTACGTT 458603
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | |||| ||||| |||||||||||||| || || || |||| ||||| ||
Sbjct 458604 ATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCAC 458663
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 458664 GAAGATCTGCAT 458675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653190854240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |