Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 196 6e-45
seq12 118 1e-21
>seq1
Length=15654088
Score = 196 bits (216), Expect = 6e-45
Identities = 1046/1650 (63%), Gaps = 42/1650 (3%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| ||||||||||| || |||||||| | | ||||| || |
Sbjct 14219710 CGCAGGTAGTACATGCCCGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTT 14219769
Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715
| |||| | || ||| || | |||| || ||| | || ||||| ||||||||
Sbjct 14219770 ATCTTGCCCA-TGGTGGGCTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAA 14219828
Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775
| || || || |||||||| | | || | | ||| ||||| || || |
Sbjct 14219829 GGCGCCGCGGTCAGCCGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTT 14219888
Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835
||| ||| ||| |||| || ||||| |||| || ||||||||||| ||| |
Sbjct 14219889 GTACAGGCGCTTGGTATCCTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGC 14219948
Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 113895
|| ||| | | |||||| | | ||||| | |||| || || |||| || |||
Sbjct 14219949 GATGATGCGGTTCTTCATGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAG 14220008
Query 113896 --ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953
||| | |||| || ||||| || ||||| ||| | | | ||||| |||| |
Sbjct 14220009 CCATGGGT--TGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGAC 14220066
Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013
||||| ||||| |||||||| ||||| |||| || || | ||| ||| |||||||||
Sbjct 14220067 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATG 14220126
Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073
|| |||| || || ||| || | ||| | | | | ||| ||||||| | |||
Sbjct 14220127 GGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCC 14220186
Query 114074 CAGTCGTAGTTGAGCT---TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
||||| | ||||| | || | | |||||| || |||| ||||| || ||
Sbjct 14220187 CAGTCCCA---GAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGC 14220243
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190
|| | ||||| ||||| ||||| ||| | ||||| | ||||| ||| |
Sbjct 14220244 GACACAGGCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCGCACGAG 14220303
Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250
|| ||||| ||||| || || |||||||| || | || | | ||||||
Sbjct 14220304 GCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCG 14220363
Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310
|| || || | || || | | || |||| || ||||| || || || |||
Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423
Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370
|| || || || || | || || || ||||| || || || || | ||
Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACG 14220483
Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430
||||| | | | || ||||| ||| |||| || | || || ||||| | |
Sbjct 14220484 TCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAG 14220543
Query 114431 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 114490
||| | || | | | |||| ||| || || || | |||||||| || |||
Sbjct 14220544 TCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCAC 14220603
Query 114491 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 114550
|||| |||||| | | |||||| | || || || |||| || || ||
Sbjct 14220604 ACAGCCACCTCATCGGGCGC-GAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGG 14220662
Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610
|||||||||| |||||| || || ||| ||| || || ||||| |||||| |
Sbjct 14220663 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAG 14220722
Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC 114669
|| | || ||||| || |||| || ||| || || | ||| | | | ||| || |
Sbjct 14220723 GGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTG--- 14220779
Query 114670 AGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTC 114723
|| | | ||| || |||| |||| |||||||||| ||| | || || |||||
Sbjct 14220780 AGCGTC-TTG---CGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTC 14220835
Query 114724 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 114783
|| || | |||| || || || || | ||||| | ||| | ||| | ||
Sbjct 14220836 GTCGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCC 14220895
Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843
|| |||||| ||||||||||| |||||||||||||| || || ||| || || ||
Sbjct 14220896 GTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCG 14220955
Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903
||| || || | || || || |||| || | || || | | || ||
Sbjct 14220956 GGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGC 14221015
Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTT 114957
||||||||| ||||| || | || | | || ||| | | ||| ||||||
Sbjct 14221016 GTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTTG-CCACCCTGGTC 14221072
Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017
|| || | || ||| || || || || ||||| || | ||| || | ||| |||
Sbjct 14221073 GACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCC 14221132
Query 115018 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATA 115075
|| || || ||| || ||| | |||| | || ||||| | | || |||
Sbjct 14221133 GTTGGTGCCGGCGATGTAGGAGCC--CGTGGCGCGGATGCGGTGGATATTGAGGCCGATA 14221190
Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135
|| || ||| ||| ||||| || || |||| || ||||||| || |||||
Sbjct 14221191 CCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATG 14221250
Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGC 115194
||| |||| | ||| |||||||| ||||| || ||||| || || || ||
Sbjct 14221251 CTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTG-GGCCTGGGGCGTGCCGGC 14221309
Query 115195 GTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224
||||||||| || || | |||||| ||||
Sbjct 14221310 GTTGAAGAGAGTGGGAGAGGCGTGGGTGAA 14221339
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 173712 AGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGT 173771
||||||| || | |||||||||||| || ||||| |||||||| | || || ||||
Sbjct 7239648 AGATGTTGGTAAGCTTGGCACCGTAACCGTTGCGGCCACCAACGGTCTTCAGCTCCTTGT 7239707
Query 173772 CATCGTAGTTTGTACTCGTGAGGAGGTGACCAAATGTAAGTTCTGGATTCCAAATACCCT 173831
||||||| || | || |||||||||||||| || | ||||| || | | | ||
Sbjct 7239708 CATCGTAATTGGAACCAGTGAGGAGGTGACCGAAAATCAGTTCGGGGATGTAGACCTTCT 7239767
Query 173832 CCTTTTCGTGCAT 173844
|||| ||||||||
Sbjct 7239768 CCTTCTCGTGCAT 7239780
>seq12
Length=9596913
Score = 118 bits (130), Expect = 1e-21
Identities = 162/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| |||||||||||||| |||||||| || || |||||| || ||
Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
||||| || || |||||||||| |||||| || | ||| | ||| |||||||||
Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222
||||| || || || |||| ||| ||| ||||||| |||||| ||||
Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGCGAGGCAAAGG---TCGACTTCTTGTCGGA 6218715
Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267
|| |||||||| ||||| | ||||| || ||| || |||||
Sbjct 6218716 AATCCACTTCAAAGCCCAGTCGGCCTTCTTACGGATGCATGGGAC 6218760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353002646400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |