Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 196 6e-45 seq12 118 1e-21 >seq1 Length=15654088 Score = 196 bits (216), Expect = 6e-45 Identities = 1046/1650 (63%), Gaps = 42/1650 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| || |||||||| | | ||||| || | Sbjct 14219710 CGCAGGTAGTACATGCCCGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTT 14219769 Query 113657 AACTTGGAGAGTGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | |||| | || ||| || | |||| || ||| | || ||||| |||||||| Sbjct 14219770 ATCTTGCCCA-TGGTGGGCTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAA 14219828 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775 | || || || |||||||| | | || | | ||| ||||| || || | Sbjct 14219829 GGCGCCGCGGTCAGCCGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTT 14219888 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| ||| ||| |||| || ||||| |||| || ||||||||||| ||| | Sbjct 14219889 GTACAGGCGCTTGGTATCCTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGC 14219948 Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 113895 || ||| | | |||||| | | ||||| | |||| || || |||| || ||| Sbjct 14219949 GATGATGCGGTTCTTCATGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAG 14220008 Query 113896 --ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 ||| | |||| || ||||| || ||||| ||| | | | ||||| |||| | Sbjct 14220009 CCATGGGT--TGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGAC 14220066 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||||| ||||| |||||||| ||||| |||| || || | ||| ||| ||||||||| Sbjct 14220067 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATG 14220126 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || |||| || || ||| || | ||| | | | | ||| ||||||| | ||| Sbjct 14220127 GGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCC 14220186 Query 114074 CAGTCGTAGTTGAGCT---TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 ||||| | ||||| | || | | |||||| || |||| ||||| || || Sbjct 14220187 CAGTCCCA---GAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGC 14220243 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190 || | ||||| ||||| ||||| ||| | ||||| | ||||| ||| | Sbjct 14220244 GACACAGGCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCGCACGAG 14220303 Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250 || ||||| ||||| || || |||||||| || | || | | |||||| Sbjct 14220304 GCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCG 14220363 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 || || || | || || | | || |||| || ||||| || || || ||| Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTA 114370 || || || || || | || || || ||||| || || || || | || Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACG 14220483 Query 114371 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 114430 ||||| | | | || ||||| ||| |||| || | || || ||||| | | Sbjct 14220484 TCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAG 14220543 Query 114431 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 114490 ||| | || | | | |||| ||| || || || | |||||||| || ||| Sbjct 14220544 TCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCAC 14220603 Query 114491 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTA 114550 |||| |||||| | | |||||| | || || || |||| || || || Sbjct 14220604 ACAGCCACCTCATCGGGCGC-GAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGG 14220662 Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610 |||||||||| |||||| || || ||| ||| || || ||||| |||||| | Sbjct 14220663 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAG 14220722 Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCAC 114669 || | || ||||| || |||| || ||| || || | ||| | | | ||| || | Sbjct 14220723 GGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTG--- 14220779 Query 114670 AGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTC 114723 || | | ||| || |||| |||| |||||||||| ||| | || || ||||| Sbjct 14220780 AGCGTC-TTG---CGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTC 14220835 Query 114724 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 114783 || || | |||| || || || || | ||||| | ||| | ||| | || Sbjct 14220836 GTCGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCC 14220895 Query 114784 ACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 || |||||| ||||||||||| |||||||||||||| || || ||| || || || Sbjct 14220896 GTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCG 14220955 Query 114844 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 ||| || || | || || || |||| || | || || | | || || Sbjct 14220956 GGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGC 14221015 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTT 114957 ||||||||| ||||| || | || | | || ||| | | ||| |||||| Sbjct 14221016 GTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTTG-CCACCCTGGTC 14221072 Query 114958 TACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 115017 || || | || ||| || || || || ||||| || | ||| || | ||| ||| Sbjct 14221073 GACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCC 14221132 Query 115018 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATA 115075 || || || ||| || ||| | |||| | || ||||| | | || ||| Sbjct 14221133 GTTGGTGCCGGCGATGTAGGAGCC--CGTGGCGCGGATGCGGTGGATATTGAGGCCGATA 14221190 Query 115076 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATC 115135 || || ||| ||| ||||| || || |||| || ||||||| || ||||| Sbjct 14221191 CCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATG 14221250 Query 115136 GAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGC 115194 ||| |||| | ||| |||||||| ||||| || ||||| || || || || Sbjct 14221251 CTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTG-GGCCTGGGGCGTGCCGGC 14221309 Query 115195 GTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 ||||||||| || || | |||||| |||| Sbjct 14221310 GTTGAAGAGAGTGGGAGAGGCGTGGGTGAA 14221339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 173712 AGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGT 173771 ||||||| || | |||||||||||| || ||||| |||||||| | || || |||| Sbjct 7239648 AGATGTTGGTAAGCTTGGCACCGTAACCGTTGCGGCCACCAACGGTCTTCAGCTCCTTGT 7239707 Query 173772 CATCGTAGTTTGTACTCGTGAGGAGGTGACCAAATGTAAGTTCTGGATTCCAAATACCCT 173831 ||||||| || | || |||||||||||||| || | ||||| || | | | || Sbjct 7239708 CATCGTAATTGGAACCAGTGAGGAGGTGACCGAAAATCAGTTCGGGGATGTAGACCTTCT 7239767 Query 173832 CCTTTTCGTGCAT 173844 |||| |||||||| Sbjct 7239768 CCTTCTCGTGCAT 7239780 >seq12 Length=9596913 Score = 118 bits (130), Expect = 1e-21 Identities = 162/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||||| || || |||||| || || Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||| || || |||||||||| |||||| || | ||| | ||| ||||||||| Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| ||| ||| ||||||| |||||| |||| Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGCGAGGCAAAGG---TCGACTTCTTGTCGGA 6218715 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 || |||||||| ||||| | ||||| || ||| || ||||| Sbjct 6218716 AATCCACTTCAAAGCCCAGTCGGCCTTCTTACGGATGCATGGGAC 6218760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353002646400