Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 453 1e-122 >seq1 Length=15654088 Score = 453 bits (502), Expect = 1e-122 Identities = 1153/1722 (67%), Gaps = 79/1722 (5%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| || |||||| |||||||| |||||| | || |||| | | | Sbjct 14221498 TACTTTGGCTTCAAGACCCTGGAGCGCTCGTACCTGCTCAAGCTCGACGGCAAGATCGTC 14221439 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 ||||| || || || || | ||||||||||| |||| || ||| || |||| | Sbjct 14221438 GAGCGCCCCCAGCACATGATCATGCGCGTCGCTGTCGGCATCTGGGGCGACAACATCGAG 14221379 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || | | | | || |||| | |||| | ||| ||| | || || Sbjct 14221378 CGCGTGCTCGAGACGTACAACCTCATGTCGAGCAAGTACTTCACCCACGCCTCTCCCACT 14221319 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 || |||||||| || || || | | ||| |||| ||||| |||||| | ||| | || Sbjct 14221318 CTCTTCAACGCCGGCACGCCCCAGGCCCAGCTGTCGTCGTGCTTCCTGGTCGAC-ATGAA 14221260 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || |||| |||| || || | ||||| |||||| |||||| | ||||| || Sbjct 14221259 GGACGACAGCATCGATGGTATCTACGACACCCTCAAAACCTGTGCCATGATCTCCAAGAT 14221200 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || ||||| ||| | ||||| | | || |||| ||| ||||||||| ||| Sbjct 14221199 GGCCGGCGGTATCGGCCTCAATATCCACCGCATCCGCGCCACGGGCTCCTACATCGCCGG 14221140 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| ||||| ||||||||| |||| || ||||| || || ||||||||| |||| || Sbjct 14221139 CACCAACGGCACATCCAACGGCATCGTGCCCATGCTACGTGTTTTCAACAACACGGCCCG 14221080 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 ||||| ||||||||||| | | | || | || || ||||||| ||||| || Sbjct 14221079 TTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATCTGGAGCCGTG 14221020 Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA- 94261 |||||| |||||| | ||| |||||||||| |||||||||||||| || ||||| Sbjct 14221019 GCACGCCGACGTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGA---GGAGAT 14220963 Query 94262 --GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 | ||| | ||||| ||| || || ||| | |||||||| || ||||| || || || Sbjct 14220962 CCGCGCCCGCGACCTTTTCCTGGCCCTATGGATCCCAGACCTATTCATGAAGCGGGTTGA 14220903 Query 94320 GAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GTTT 94378 ||| ||| || ||||| || | || ||||| || || || || || | ||| | | Sbjct 14220902 GAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCTGGCCTAGCAGACTGCTA 14220843 Query 94379 GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGG 94438 | || | || || | ||||| | ||||| ||||||||| | | ||| Sbjct 14220842 CGGCGACGAG-TTCGAGGCTTTGTACGAAAAGTACGAGCGTGAGGGCAAGGGCCGCAAGA 14220784 Query 94439 TTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGC 94498 | | || ||||||||| || ||| | || | ||| ||||| || | | Sbjct 14220783 CGCTCAAGGCGCAAAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACC 14220724 Query 94499 CCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 ||| ||| ||| ||| || | ||| |||| |||| ||||||| || |||| || Sbjct 14220723 CCTTCATGCTGTACAAAGACCACTG-CAACCGCAAGAGCAACCAGAAGAACCTGGGCACC 14220665 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||| ||||| || |||||||||||||| |||||||| | | || || ||| | ||| Sbjct 14220664 ATCCGCAGCTCTAACCTGTGCACCGAGATCGTCGAGTACTC-GCGCCCGATGAGGTGGCT 14220606 Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTC-CACTTTCGTGCGAGATGCCTACA------- 94669 ||||| ||||||| || | ||| | || ||| || ||| ||||| Sbjct 14220605 GTGTGCAACCTGGCGTCGTTGGCGCTGCCGCAGTTT-GT-CGA-----CTACAACGAGGG 14220553 Query 94670 CGTCTACTGCTTCGTTCG--ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT 94727 || ||| |||| || | ||| | ||| |||| | | || | | || Sbjct 14220552 CGCCTATGACTTC---CGGAAGCTGCACGAG---GTGA----CCCAGGTCG--TCGTTCG 14220505 Query 94728 GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAA 94787 || || |||| | | |||||| |||| |||||| |||| |||||| ||| || Sbjct 14220504 TAATCTTAACAAGATCATCGACGTCAACTACTACCCGGTCCAGGAGGCTCGTAACAGCAA 14220445 Query 94788 CCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGAT 94847 |||| || |||||||||||| | ||||| |||||| | || || || | | | | Sbjct 14220444 CCTGCGCCACCGGCCCATCGGCCTAGGCGTGCAGGGTCTGGCCGATGCCTTCCTAGCGCT 14220385 Query 94848 GCGTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 ||| ||||||| ||| ||| ||| || ||| | | || | | || || || | || Sbjct 14220384 GCGCCTGCCCTTCGAGTCTCCCGAGGCTCGCGAG-CTCAACAAGCAGATCTTTGAGACCA 14220326 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACG---GCGGGCCAC 94963 | || ||| ||| ||| ||| || | | || || | | || || || ||| Sbjct 14220325 TCTACCACGCCGCCCTGA------CCG-CCTCGT-GCGAGCTGGCGCGCGAGCAGGGCAC 14220274 Query 94964 ACGAATCG---TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | | ||| | | || ||||| || |||||||| | |||| |||| | ||| Sbjct 14220273 -CTACTCGACATACGAGGGCTCGCCTGTGTCGCAGGGCATCCTGCAGTACGACATGTGGA 14220215 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACA 95078 || ||||| |||| || | |||||||| |||| | ||| || | | | || Sbjct 14220214 ACGTCAAGCCGTCGGAGCTCTGGGACTGGGAGTCGCTCAAGGCG--GACATCAAGCAGCA 14220157 Query 95079 CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCT 95138 ||||||| ||| ||||||||||||| ||||||||||| ||| |||| ||||||| || Sbjct 14220156 CGGTGTGCGCAACTCGCTGCTTGTGGCGCCCATGCCCACCGCCAGCACGTCGCAGATTCT 14220097 Query 95139 TGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGC 95198 ||||||||||||| ||||| |||| ||| |||||| | ||| | | || |||||||| Sbjct 14220096 GGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGCGTGCTCGC 14220037 Query 95199 CGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTG 95256 ||| || |||| ||| ||||| ||||| ||||||| ||| || || || Sbjct 14220036 CGGCGAGTTCCAGGTCGTCAACCCATGGCTCCTGAAGGACCTG--GTCGAGCTTGGCTTG 14219979 Query 95257 TGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATC 95313 ||| ||||| | ||||||| | | |||| | ||||||| ||||||||||| Sbjct 14219978 TGGTCCGACAACATGAAGAACCGCATCAT---CGCCGAGGGCGGCTCCATCCAGAACATC 14219922 Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || || ||||| | |||| || |||||||| || ||||||||| |||||||| Sbjct 14219921 GCCAGCATCCCCGAGGATACCAAGCGCCTGTACAAGACGGTCTGGGAGATCTCGCAGCGC 14219862 Query 95374 GTGATACTCGACCA---CGCGGCCGCCCGCGGGCCCTTCATC 95412 | ||| ||| ||||| | |||||| |||||||| Sbjct 14219861 ---ACCGTCGTCCAGATGGCGGCTGACCGCGGCGCCTTCATC 14219823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722705276800