Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 269 3e-67
seq12 118 1e-21
seq67 111 2e-19
seq23 96.9 3e-15
>seq1
Length=15654088
Score = 269 bits (298), Expect = 3e-67
Identities = 950/1458 (65%), Gaps = 58/1458 (4%)
Strand=Plus/Plus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || |||||||| || | ||| || | | || | ||| ||| | |
Sbjct 14220014 GGTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGG 14220073
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| | ||||| ||||| || || || | |||| | ||||| |||||| |||||
Sbjct 14220074 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCA 14220133
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206
| | || || || |||| |||||| ||| || |||| |||| | || || ||| |||
Sbjct 14220134 CAAGCAGCGAGTTGCGCACACCGTGCTGCTTGA-TGTCCGCCTTGAGCGACTCCCAGTCC 14220192
Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGG 153264
|| ||| ||||||| | ||||||||||||||||||| | | | | |||| | |
Sbjct 14220193 CAGAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGAC--ACAG 14220250
Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCC--T 153321
| ||| | | || |||| |||| | | || | ||||| ||||| | || | |
Sbjct 14220251 GCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCG-CGCGCCAGCTCGCA-CGAGGCGGT 14220308
Query 153322 CGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGC 153381
| || ||| | | ||| ||||| || ||| || || ||||| || || ||
Sbjct 14220309 C-AGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGAG 14220367
Query 153382 TCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGA 153441
|||| | |||| ||||||| | ||||| |||||||||||||| | || | |||||
Sbjct 14220368 ACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGA 14220427
Query 153442 TGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATC 153499
|||| || || | ||||||| | || ||| || | || |||| ||| ||
Sbjct 14220428 TGGGCCGGTGGCGCAGGTTGCTGTTACGAGC-CTC-CTGGACCGGGTAGTAGTTGACGTC 14220485
Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559
||| || ||||| || || || || || || | || | | | | || ||| ||| ||
Sbjct 14220486 GATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGTC 14220545
Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619
||||| |||| | | || | | || || | |||||||| || || ||
Sbjct 14220546 ATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACAC 14220605
Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCTGCATTT 153676
||| ||| |||| || ||||| |||||||||| ||| ||||| |||||
Sbjct 14220606 AGCCACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC---G 14220661
Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736
||| ||||| || | ||| ||||| ||||| ||||| ||||||| | |||||| |
Sbjct 14220662 GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAA 14220721
Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCG 153793
|| ||| |||||| || | |||| ||| | ||| ||| | |||||
Sbjct 14220722 GGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC---ACAGCTTTTGCGCCTT 14220778
Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853
| | || || |||||| | |||||| ||||||| ||| ||||||||
Sbjct 14220779 GAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTC 14220838
Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTC 153913
|||||||||||| || ||||| || |||| | || ||||| |||| ||| |||
Sbjct 14220839 GCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCA------GTC 14220892
Query 153914 GGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTC 153967
| |||| || || |||||| || || || | ||| || || | |||||
Sbjct 14220893 GCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTC 14220952
Query 153968 GCGCGCCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGA-GCACGCTATAGA 154023
||| || | |||||| ||| | ||||| ||| | || | || | | | |
Sbjct 14220953 GCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACA 14221008
Query 154024 TGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCT 154080
|||||||||||| || || | |||| ||| | ||| || ||| || || ||||
Sbjct 14221009 CGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCT 14221068
Query 154081 GATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGG 154140
| ||||||| || || | |||||||| || || | |||||| | | |||| | | |
Sbjct 14221069 GGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATG 14221128
Query 154141 TGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAA 154200
|||||||||| ||| | | ||| |||||| | | || | || | ||| |
Sbjct 14221129 TGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGA 14221188
Query 154201 TGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGA 154260
| |||||| | ||| || || || ||| || || |||||| || ||||
Sbjct 14221189 TACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGA 14221248
Query 154261 TGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCG 154320
|||| ||||| | | ||| || ||| ||||| ||| || | | |||| || |
Sbjct 14221249 TGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGG 14221308
Query 154321 CCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCG---GTACG 154377
| ||||| |||||| ||||| || | ||| || |||| |||| | |||||
Sbjct 14221309 CGTTGAAGAGAGTGGGAGAGGCGTGGGTGA--AGTACTT-GCTCGACATGAGGTTGTACG 14221365
Query 154378 TTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGT 154437
| |||| || ||||| | ||||| ||||||| ||||||||||||| |||||
Sbjct 14221366 TCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGT 14221425
Query 154438 GCTGCGGACGTTCGGCGA 154455
|||| || || ||| |||
Sbjct 14221426 GCTGGGGGCGCTCGACGA 14221443
>seq12
Length=9596913
Score = 118 bits (130), Expect = 1e-21
Identities = 295/441 (67%), Gaps = 23/441 (5%)
Strand=Plus/Minus
Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466
||||| ||| || ||||| | || || ||| ||||||| ||||||| | |
Sbjct 6218679 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTG 6218620
Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526
|| | | ||| | ||||| ||||| || ||| ||||||| | || || || |||||
Sbjct 6218619 AAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 6218560
Query 52527 GGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACC-GAAA- 52578
|| ||||||||||||||||| ||||| || | ||| || | | | || | ||
Sbjct 6218559 GGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACATGAAGAACCGGCCCAGCAAG 6218500
Query 52579 -AATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAG 52637
|| || ||| | || || ||| || || || || ||||| | |||
Sbjct 6218499 CAAATGA--TCG---AGGA----GATCATCGTC---GATGCTGTCAAGATCGAGCAAGAG 6218452
Query 52638 TTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAG 52697
|| | || | || ||||| | |||||| ||||||||| || | |||| ||
Sbjct 6218451 TTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGAACCTCATGAAGCAG 6218392
Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAA 52756
||||||||||| ||||| || || || |||| |||||| | | ||| || || |
Sbjct 6218391 TACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTCGGGAATGACAAGGT-CTACCG 6218333
Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816
||| ||| || || || || ||| | ||||| || || | |||||||||||||| ||
Sbjct 6218332 CGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGCAAGACCAACTTCTT 6218273
Query 52817 CGAGAAGCGAGTCGGCGAGTA 52837
||| ||||| || ||||||||
Sbjct 6218272 CGAAAAGCGCGTGGGCGAGTA 6218252
>seq67
Length=2709248
Score = 111 bits (122), Expect = 2e-19
Identities = 143/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||| | ||| || ||||||||| || || |||| |
Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540
||| || ||||| ||||| ||||| ||||| || ||||| ||| | || | || ||
Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTC-CTGAATCTTCGACTTGACAT 459058
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | ||||||||||| | || | || || || ||||| |||||
Sbjct 459059 TG-TCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTG 459117
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 459118 ACGAAAATCTGCAT 459131
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| |||| ||||| |||| || | | |||||||| |||||||||||||| |
Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||||| || || || || | |||| || ||||| |||||||||||
Sbjct 458509 AAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 458568
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || || || || ||| || |||| | || | || |||| || || ||
Sbjct 458569 ATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACT 458628
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||| ||| | ||||| ||||||| || || || || |||||||||
Sbjct 458629 TCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
>seq23
Length=7462253
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/229 (70%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| ||||| |||| |||| | |||||| || |||||||||||| |
Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || ||||| || | | |||| || ||||| ||||| || ||
Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGG 7209879
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | |||| || | |||||| ||||||||||
Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATCGTGTCGCTCGACTCCAC 7209820
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||| | || | || || || || || || || ||||| |||||||||
Sbjct 7209819 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 7209771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261903737600
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