Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 269 3e-67 seq12 118 1e-21 seq67 111 2e-19 seq23 96.9 3e-15 >seq1 Length=15654088 Score = 269 bits (298), Expect = 3e-67 Identities = 950/1458 (65%), Gaps = 58/1458 (4%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| || | ||| || | | || | ||| ||| | | Sbjct 14220014 GGTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGG 14220073 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | ||||| ||||| || || || | |||| | ||||| |||||| ||||| Sbjct 14220074 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCA 14220133 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | | || || || |||| |||||| ||| || |||| |||| | || || ||| ||| Sbjct 14220134 CAAGCAGCGAGTTGCGCACACCGTGCTGCTTGA-TGTCCGCCTTGAGCGACTCCCAGTCC 14220192 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGG 153264 || ||| ||||||| | ||||||||||||||||||| | | | | |||| | | Sbjct 14220193 CAGAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGAC--ACAG 14220250 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGCC--T 153321 | ||| | | || |||| |||| | | || | ||||| ||||| | || | | Sbjct 14220251 GCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCG-CGCGCCAGCTCGCA-CGAGGCGGT 14220308 Query 153322 CGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGC 153381 | || ||| | | ||| ||||| || ||| || || ||||| || || || Sbjct 14220309 C-AGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGAG 14220367 Query 153382 TCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGA 153441 |||| | |||| ||||||| | ||||| |||||||||||||| | || | ||||| Sbjct 14220368 ACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGA 14220427 Query 153442 TGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATC 153499 |||| || || | ||||||| | || ||| || | || |||| ||| || Sbjct 14220428 TGGGCCGGTGGCGCAGGTTGCTGTTACGAGC-CTC-CTGGACCGGGTAGTAGTTGACGTC 14220485 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 ||| || ||||| || || || || || || | || | | | | || ||| ||| || Sbjct 14220486 GATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGTC 14220545 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||||| |||| | | || | | || || | |||||||| || || || Sbjct 14220546 ATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACAC 14220605 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCTGCATTT 153676 ||| ||| |||| || ||||| |||||||||| ||| ||||| ||||| Sbjct 14220606 AGCCACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC---G 14220661 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 ||| ||||| || | ||| ||||| ||||| ||||| ||||||| | |||||| | Sbjct 14220662 GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAA 14220721 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCG 153793 || ||| |||||| || | |||| ||| | ||| ||| | ||||| Sbjct 14220722 GGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC---ACAGCTTTTGCGCCTT 14220778 Query 153794 CACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTC 153853 | | || || |||||| | |||||| ||||||| ||| |||||||| Sbjct 14220779 GAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTC 14220838 Query 153854 GCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTC 153913 |||||||||||| || ||||| || |||| | || ||||| |||| ||| ||| Sbjct 14220839 GCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCA------GTC 14220892 Query 153914 GGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTC 153967 | |||| || || |||||| || || || | ||| || || | ||||| Sbjct 14220893 GCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTC 14220952 Query 153968 GCGCGCCTTGCAATCCTCCGCGCC---CATGTTGCGTTTCAGATTGA-GCACGCTATAGA 154023 ||| || | |||||| ||| | ||||| ||| | || | || | | | | Sbjct 14220953 GCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACA 14221008 Query 154024 TGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCT 154080 |||||||||||| || || | |||| ||| | ||| || ||| || || |||| Sbjct 14221009 CGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCT 14221068 Query 154081 GATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGG 154140 | ||||||| || || | |||||||| || || | |||||| | | |||| | | | Sbjct 14221069 GGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATG 14221128 Query 154141 TGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAA 154200 |||||||||| ||| | | ||| |||||| | | || | || | ||| | Sbjct 14221129 TGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGA 14221188 Query 154201 TGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGA 154260 | |||||| | ||| || || || ||| || || |||||| || |||| Sbjct 14221189 TACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGA 14221248 Query 154261 TGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCG 154320 |||| ||||| | | ||| || ||| ||||| ||| || | | |||| || | Sbjct 14221249 TGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGG 14221308 Query 154321 CCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCG---GTACG 154377 | ||||| |||||| ||||| || | ||| || |||| |||| | ||||| Sbjct 14221309 CGTTGAAGAGAGTGGGAGAGGCGTGGGTGA--AGTACTT-GCTCGACATGAGGTTGTACG 14221365 Query 154378 TTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGT 154437 | |||| || ||||| | ||||| ||||||| ||||||||||||| ||||| Sbjct 14221366 TCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGT 14221425 Query 154438 GCTGCGGACGTTCGGCGA 154455 |||| || || ||| ||| Sbjct 14221426 GCTGGGGGCGCTCGACGA 14221443 >seq12 Length=9596913 Score = 118 bits (130), Expect = 1e-21 Identities = 295/441 (67%), Gaps = 23/441 (5%) Strand=Plus/Minus Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 ||||| ||| || ||||| | || || ||| ||||||| ||||||| | | Sbjct 6218679 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTG 6218620 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | ||| | ||||| ||||| || ||| ||||||| | || || || ||||| Sbjct 6218619 AAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGACGAG 6218560 Query 52527 GGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACC-GAAA- 52578 || ||||||||||||||||| ||||| || | ||| || | | | || | || Sbjct 6218559 GGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACATGAAGAACCGGCCCAGCAAG 6218500 Query 52579 -AATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAG 52637 || || ||| | || || ||| || || || || ||||| | ||| Sbjct 6218499 CAAATGA--TCG---AGGA----GATCATCGTC---GATGCTGTCAAGATCGAGCAAGAG 6218452 Query 52638 TTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAG 52697 || | || | || ||||| | |||||| ||||||||| || | |||| || Sbjct 6218451 TTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGAACCTCATGAAGCAG 6218392 Query 52698 TACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAA 52756 ||||||||||| ||||| || || || |||| |||||| | | ||| || || | Sbjct 6218391 TACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTCGGGAATGACAAGGT-CTACCG 6218333 Query 52757 CGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTT 52816 ||| ||| || || || || ||| | ||||| || || | |||||||||||||| || Sbjct 6218332 CGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGCAAGACCAACTTCTT 6218273 Query 52817 CGAGAAGCGAGTCGGCGAGTA 52837 ||| ||||| || |||||||| Sbjct 6218272 CGAAAAGCGCGTGGGCGAGTA 6218252 >seq67 Length=2709248 Score = 111 bits (122), Expect = 2e-19 Identities = 143/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | ||| || ||||||||| || || |||| | Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| || ||||| ||||| ||||| ||||| || ||||| ||| | || | || || Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTC-CTGAATCTTCGACTTGACAT 459058 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||||||||| | || | || || || ||||| ||||| Sbjct 459059 TG-TCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTG 459117 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 459118 ACGAAAATCTGCAT 459131 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| |||| ||||| |||| || | | |||||||| |||||||||||||| | Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | |||| || ||||| ||||||||||| Sbjct 458509 AAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGG 458568 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || || || ||| || |||| | || | || |||| || || || Sbjct 458569 ATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACT 458628 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| ||| | ||||| ||||||| || || || || ||||||||| Sbjct 458629 TCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676 >seq23 Length=7462253 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| |||| |||| | |||||| || |||||||||||| | Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || ||||| || | | |||| || ||||| ||||| || || Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGG 7209879 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||| |||||||||| Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATCGTGTCGCTCGACTCCAC 7209820 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || ||||| ||||||||| Sbjct 7209819 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 7209771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261903737600