Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 8e-36
seq67 116 4e-21
seq23 111 1e-19
seq12 104 2e-17
>seq1
Length=15654088
Score = 165 bits (182), Expect = 8e-36
Identities = 1001/1569 (64%), Gaps = 80/1569 (5%)
Strand=Plus/Plus
Query 146034 CAAG-TCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAA 146092
|||| || || ||| |||| | ||| | ||||||| ||||| |||||||||||||| |
Sbjct 14219984 CAAGCTCGACCAGGTCCTTCAGGAGCCATGGGTTGACGACCTGGAACTCGCCGGCGAGCA 14220043
Query 146093 CGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCT 146152
|||| | | | || | |||| ||| | |||||||| |||||||||| || || ||||
Sbjct 14220044 CGCGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCT 14220103
Query 146153 GCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTG-TCTT 146211
||| ||| | ||||| |||||| |||||| |||| ||||| | ||| ||||| | |
Sbjct 14220104 GCGACGTGCTGGCGGTGGGCATGGGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCT 14220163
Query 146212 TGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAG 146271
|| || | || || ||| | ||| | | |||| || | || || |
Sbjct 14220164 TG-ATGTCCGCCTTGAGCGACTCCCAGTCCCAGA---GCTCCGACGGCTTGACGTTCCAC 14220219
Query 146272 TTGTCGTAATGCATAGTGCC--GCGGAACAGG-GGGCTATTCTCGTACGATTCATAAGGA 146328
||||||| |||| |||| ||| ||||| | || |||||| | | | |||
Sbjct 14220220 ATGTCGTACTGCAGGATGCCCTGCGACACAGGCGAGC---CCTCGTATG-TCGAGTAGGT 14220275
Query 146329 CCGTCGATCTTG-GCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGC 146387
| | || | ||||| ||||| || ||| || | ||| ||||||||
Sbjct 14220276 GCCCTGCTCGCGCGCCAGCTCGCACGAGGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAA 14220335
Query 146388 GATCATGTAGTTGACGCTC-CTGGCCTCCTCGCTGTCGTAGGGGATATCGAGAAGC---A 146443
|||| | ||||| |||| | ||||| ||| |||| | | | ||| |
Sbjct 14220336 GATCTGCTTGTTGA-GCTCGCGAGCCTCGGGAGACTCGAAGGGCA---GGCGCAGCGCTA 14220391
Query 146444 CAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGT 146503
||||| ||||| |||||||| | || | || | ||| ||||| | ||| ||||
Sbjct 14220392 GGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGATGGGCCGGTGGCGCAGGTTGCTGT 14220451
Query 146504 T-CGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACG 146562
| || | || | | ||| |||| |||| ||||||||||||||| |||||||| |||
Sbjct 14220452 TACGAGCCTCCTGGACCGGG-TAGTAGTTGACGTCGATGATCTTGTTAAGATTACGAACG 14220510
Query 146563 ACAATTTTCGTCAAACGATTCAG---CAGGACATAGTCAAA--TGTTTTAGTTTTAACGT 146617
|| | | |||| | ||| | ||| ||||| | | | ||| || ||
Sbjct 14220511 ACGACCTGGGTCACCTCGTGCAGCTTCCGGA---AGTCATAGGCGCCCTCGTTGTA--GT 14220565
Query 146618 TGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGC 146677
||| ||| | || | || |||| ||| || || || ||| || | |||
Sbjct 14220566 CGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGCCACCTCATC--GGGCGC 14220623
Query 146678 -AATACTGCACAATCTCGGCGCAGAGGTT---GCTGCACTTGATGATGCCCAAAtttttt 146733
| |||| || ||||||| ||| ||||| ||||| |||| |||||| || ||
Sbjct 14220624 GAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC---GGATGGTGCCCAGGTTCTTC 14220680
Query 146734 tGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCG 146790
||||| || ||| ||||||| |||| ||||| |||||| | || || || |||
Sbjct 14220681 TGGTTGCT---CTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCG 14220737
Query 146791 ACATTGGTCTCGACGATGAATCTAAACAAATCTCTGGC-CTTTACTTGTCTTTCGTACAG 146849
| || ||||| |||| | | || | || | || | || ||||| || |
Sbjct 14220738 GTCTGGGCCTCGAGGATG--GCATACCACAGCTTTTGCGCCTTGAGCGTCTTGCGGCCCT 14220795
Query 146850 TTTATTC-TTTTCGTATTTCTCGTACAATATTTCAAAACTAG-AACCGTACTCGTCGAGG 146907
| || ||||| || |||||||| || |||| | ||||| |||
Sbjct 14220796 TGCCCTCACGCTCGTACTTTTCGTACAAAGCCTC-GAACTCGTCGCCGTAGCAGTCTGCT 14220854
Query 146908 AGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCC 146967
||||| || ||| ||||| || | |||| ||| || |||| || || || | |
Sbjct 14220855 AGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTC 14220914
Query 146968 ATAAACAAATCGGGAATCCAAAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAG 147027
|| || | || || ||||| ||| |||| | | |||||| || | ||||| |
Sbjct 14220915 ATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTG 14220974
Query 147028 CCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTAT 147087
|| ||| | || || ||||| ||| | | || | ||||| ||||||| ||
Sbjct 14220975 CCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAG 14221034
Query 147088 GCGGCGAGTGCGCCTTTTCGC---TTACCGCCCTGATCGACGTGGCGCACCATGTTATTG 147144
||| | ||||| ||| || || ||||| ||||||| || || |||| |||
Sbjct 14221035 ATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTG 14221094
Query 147145 AAGACTCGTAACATGGACACGAGGCCGCCGGAT------TTTGTGGTGCCGTTGTA---- 147194
|| || |||| ||||| ||||| |||| |||| || ||| | || ||||
Sbjct 14221095 AAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAG 14221154
Query 147195 ---TTGAGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAA 147251
|| |||| || || || | | || |||| ||| ||| ||| || || ||||
Sbjct 14221155 CCCGTG-GCGCGGATGCGGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCAT 14221213
Query 147252 AGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAG 147311
|| | | | ||| | |||||| || ||||||||||| ||||| ||| |||
Sbjct 14221214 GGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAG 14221273
Query 147312 GAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTG 147371
||| ||||| ||| |||| | |||||| || || || ||||| ||||||
Sbjct 14221274 GAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTG 14221333
Query 147372 CGTGA---ACGTGCCCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATC 147428
|||| || ||| | || ||| | | ||||| || | ||| | | || ||
Sbjct 14221334 GGTGAAGTACTTGCTC-GA--CATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTC 14221390
Query 147429 GCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTC 147488
||| ||| | | ||||||||||||| |||||||||||| || || | ||| | |
Sbjct 14221391 GCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCC 14221450
Query 147489 ATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACCAAAGTACTTGTAGTCGT 147547
| || || | || || | | | | ||| || ||||| |||||||||| |||| |
Sbjct 14221451 GTCGAGCTTGAGCAGGTA-CGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGA 14221509
Query 147548 AGTCCCTGT 147556
|||||| ||
Sbjct 14221510 AGTCCCGGT 14221518
>seq67
Length=2709248
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || ||||| ||| | || ||| || || ||||| || || ||| |
Sbjct 458940 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAA 458999
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041
||||| |||||||| |||||||| || |||||||||||| || ||| ||||| |
Sbjct 459000 GATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATT 459059
Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| |||||||| | ||| || || | ||| | || ||||| ||||| ||||| ||
Sbjct 459060 GTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGAC 459119
Query 127102 AAAAATCTGCAT 127113
|||||||||||
Sbjct 459120 GAAAATCTGCAT 459131
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | |||||| || | || ||| || || || |||||||| |
Sbjct 458677 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAC 458736
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || || ||||||| || |||||||| || ||
Sbjct 458737 AGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGG 458796
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| ||||||||||| || ||| ||| | |||| |||| ||||| | ||||||
Sbjct 458797 ATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTG-TCGATCGTGTCTGATGACTCGAC 458855
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | || |||||||| || || || || || ||||||||
Sbjct 458856 TTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975
||| ||||||||||| || ||||| || | || || || || || || || ||
Sbjct 459162 CGTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCCTCGAGTTGCTTGCC 459221
Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035
|||| |||| | |||||||| |||||||| || |||||||||||| ||| || |||
Sbjct 459222 AGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCCTGGATCTTGGACTT 459281
Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCA 127091
|| |||| |||| ||| || | | ||| || |||| ||| | || ||||| ||||
Sbjct 459282 GACGTTG-TCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTCA 459337
Score = 89.7 bits (98), Expect = 5e-13
Identities = 161/234 (69%), Gaps = 1/234 (0%)
Strand=Plus/Plus
Query 126881 ACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAA 126940
|||| ||| || || | |||| ||| | || | || ||||| || ||||| |||||
Sbjct 458444 ACTG-TCCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAG 458502
Query 126941 TCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCG 127000
|| || || || ||| || ||||| || || ||| |||||| |||||||| ||
Sbjct 458503 TCCGACAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCC 458562
Query 127001 GGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTC 127060
||||| ||||||||||| ||| ||| || ||| | | || | || || |
Sbjct 458563 GGAGGGATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGAT 458622
Query 127061 TCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||||||||| || | ||||| || |||| || || || || |||||||||
Sbjct 458623 TCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
>seq23
Length=7462253
Score = 111 bits (122), Expect = 1e-19
Identities = 162/228 (71%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||| | |||| ||| ||| || || || ||||| ||| |
Sbjct 7209997 CCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 7209938
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| ||| || |||||||| || || |||||| |||||||| || || ||
Sbjct 7209937 AGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGGGG- 7209879
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| ||| || ||||| | |||| ||||| | ||| ||
Sbjct 7209878 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACC 7209819
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|| | ||| | || ||||| || || || || ||||| |||||||||
Sbjct 7209818 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 7209771
>seq12
Length=9596913
Score = 104 bits (114), Expect = 2e-17
Identities = 329/501 (66%), Gaps = 17/501 (3%)
Strand=Plus/Minus
Query 47085 AAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTC-ACTCTGGCCGAACGTTT 47143
|||||||| ||||| |||||| ||| || | || ||| || | ||| || |
Sbjct 6218742 AAGGCCGACTGGGCTTTGAAGTGGATTTCCGACAAGAA-GTCGACCTTTGCCTCGCGGCT 6218684
Query 47144 GATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTA 47203
|| || || ||| ||| ||||| |||||||| || |||||| | || || |
Sbjct 6218683 CATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTG 6218624
Query 47204 CATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263
|||| | || | ||||| ||||| || || ||||||||| ||||| | ||
Sbjct 6218623 GCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGAGCTCATCTCTCGTGA 6218564
Query 47264 CGAAGGCCTGCACACCAACTTTGCCTG---TCTCTACTACAACACTA-GAGTCGATCAA- 47318
||| || |||||||| |||||||||| ||||| || | ||| | || || | |
Sbjct 6218563 CGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTCCCACATGAAGAACCGGCCCAG 6218504
Query 47319 -AAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377
||| | || | || || || || | | ||| || ||| || ||| ||
Sbjct 6218503 CAAGC---AAATG---ATCG--AG-GAGATCATCGTCGATGCTGTCAAGATCGAGCAAGA 6218453
Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437
||| | ||||||| ||||| | | | || |||||| || | | |||| |
Sbjct 6218452 GTTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGAACCTCATGAAGCA 6218393
Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497
||||||||| || || || |||||||| || ||| || | || |||| | ||||
Sbjct 6218392 GTACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTCGGGAATGACAAGGTCTACCG 6218333
Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTT 47557
| | || || ||||| || ||| | ||||| || || | |||||||||||||| ||
Sbjct 6218332 CGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGGCAAGACCAACTTCTT 6218273
Query 47558 CGAGAAGCGCGTCGGCGAATA 47578
||| |||||||| ||||| ||
Sbjct 6218272 CGAAAAGCGCGTGGGCGAGTA 6218252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500324499200
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