Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 5e-25
>seq1
Length=15654088
Score = 129 bits (142), Expect = 5e-25
Identities = 915/1453 (63%), Gaps = 46/1453 (3%)
Strand=Plus/Minus
Query 122890 TCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGC 122949
|||| | ||| ||| ||| || || || ||| |||||||||||||| | ||| | |
Sbjct 14221455 TCGACGGCAAGATCGTCGAGCGCCCCCAGCACATGATCATGCGCGTCGCTGTCGGCAT-C 14221397
Query 122950 ACGGACG-CGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008
|| || | ||||||| || | ||| || ||| | | ||||| || | |||
Sbjct 14221396 TGGGGCGACAACATCGAGCGCGTGCTCGAGACGTACAACCTCATGTCGAGCAAGTACTTC 14221337
Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068
|| ||||| ||||||| | ||| |||||||||| | | ||| |||| |||||
Sbjct 14221336 ACCCACGCCTCTCCCACTCTCTTCAACGCCGGCACGCCCCAGGCCCAGCTGTCGTCGTGC 14221277
Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128
|| || || | || || ||||||||| |||||||| || || | ||
Sbjct 14221276 TTCCTGGTCGACATGAAGGACGACAGCATCGATGGTATCTACGACACCCTCAAAACCTGT 14221217
Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGC 123188
|| |||| ||||| | | |||||| || ||| | || | ||| | | | ||| |
Sbjct 14221216 GCCATGATCTCCAAGATGGCCGGCGGTATCGGCCTCAATATCCACCGCATCCG-CGCCAC 14221158
Query 123189 GGAAGCC-GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGT 123247
|| || |||| ||||| |||| | || ||| ||| ||||||| || ||
Sbjct 14221157 GGGCTCCTACATCGCCGGCACCAACGGCACATCCAACGGCATCGTGCCCATGCTACGTGT 14221098
Query 123248 TTACAATAACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGC 123304
|| ||| ||| | | || ||||||||||||| || ||| ||| ||||| | ||
Sbjct 14221097 TTTCAACAACACGGCCCGTTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGC 14221038
Query 123305 GATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC---AA 123361
|||||||| || |||||||||| || |||| ||| || | | | ||| ||
Sbjct 14221037 CATCTATCTGGAGCCGTGGCACGCCGACGTGTTCGAGTTCCTCGACCT---GCGCAAGAA 14220981
Query 123362 CATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTT 123421
| || ||| || | |||||||| | || || ||||| | || || |
Sbjct 14220980 CCACGGCAAGGAGGAGATCCGCGCCCGCGACCTTTTCCTGGCCCTATGGATCCCAGACCT 14220921
Query 123422 GTTTATGCGACGCGT--AAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGT 123479
|| ||| || || | |||| |||||| ||| |||||||||| ||| | |||
Sbjct 14220920 ATTCATGAAGCGGGTTGAGAAGA--ACGGCGACTGGACGCTCATGTGCCCCAACGAGTGC 14220863
Query 123480 CCCGGCTTGAGC-GACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCG 123538
|| ||| | ||| ||| |||||| | |||| || | ||||||| | ||||||||
Sbjct 14220862 CCTGGCCT-AGCAGACTGCTACGGCGACGAGTTCGAGGCTTTGTACGAAAAGTACGAGCG 14220804
Query 123539 CGAAGGCAAACAGGTTAGTCAG--GTTC-CGGCACGTGATTTGTTCAAATTTATTATCGA 123595
|| |||| ||| | || | || ||| | | ||| | || ||||
Sbjct 14220803 TGAGGGCA---AGGGCCGCAAGACGCTCAAGGCGCAAAAGCTGTGGTATGCCATCCTCGA 14220747
Query 123596 AACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAAC 123655
| || ||| || || | || | |||||| ||||||||| ||||||| | || |
Sbjct 14220746 GGCCCAGACCGAGACTGGCAACCCCTTCATGCTGTACAAAGACCACTGCAACCGCAAGAG 14220687
Query 123656 CAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA 123715
||| |||| ||| |||| || || | ||| || ||| |||| || |||| ||
Sbjct 14220686 CAACCAGAAGAACCTGGGCACCATCCGCAGCTCTAACCTGTGCACCGAGATCGTCGAGTA 14220627
Query 123716 CAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAATCGTTGCG 123774
| || ||||| | ||||| ||||| || |||| ||| || ||| || | | |
Sbjct 14220626 C-TCGCGCCCGATGAGGTGGCTGTGTGCAACCTGGCGTCG-TTGGCGCTGCCGCAGTTTG 14220569
Query 123775 TCGA----AA--ACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAG 123828
|||| || | ||||| | | | |||| | ||| | | || | || |
Sbjct 14220568 TCGACTACAACGAGGGCGCCTATGACTTCCGGAAGCTGCACGAGGTGACCCAGGTCGTCG 14220509
Query 123829 TAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGT 123888
| ||| | ||||| || ||||| || || | || || | |||| || |||
Sbjct 14220508 TTCGTAATCTTAACAAGATCATCGACGTCAACTACTACCCGGTCCAGGAGGCTCGTAACA 14220449
Query 123889 CTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAA 123948
|| || ||| | || |||| | ||| | || || ||||||| || || ||
Sbjct 14220448 GCAACCTGCGCCACCGGCCCATCGGCCTAGGCGTGCAGGGTCTGGCCGATGCCTTCCTAG 14220389
Query 123949 TGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAA 124008
||||||| |||| | ||| ||| || ||| || | ||| || || |
Sbjct 14220388 CGCTGCGCCTGCCCTTCGAGTCTCCCGAGGCTCGCGAGCTCAACAAGCAGATCTTTGAGA 14220329
Query 124009 CAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACG 124068
| || || ||| ||| || || ||||| || ||| || ||| | |||
Sbjct 14220328 CCATCTACCACGCCGCCCTGACCGCCTCGTGCGAGCTGGCGCGCGAGCAGGGCACCTACT 14220269
Query 124069 AAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTA 124128
| |||| |||| || | | | || || ||||||||||||||||||| | |
Sbjct 14220268 CGACATACGAGGGCTCGCCTGTGTCGCAGGGCATCCTGCAGTACGACATGTGGAACGTCA 14220209
Query 124129 CACCGACAAATTTGTGGGACT-GGAG-CGTTTTAAAACAA--CGCATATC--GACGCACG 124182
||| | | | ||||||| |||| || | ||| || | ||| | |||||
Sbjct 14220208 AGCCGTCGGAGCTCTGGGACTGGGAGTCGCT------CAAGGCGGACATCAAGCAGCACG 14220155
Query 124183 GTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAG 124242
|| |||| ||||||||| | |||||| |||||| || || | ||| | || ||| | |
Sbjct 14220154 GTGTGCGCAACTCGCTGCTTGTGGCGCCCATGCCCACCGCCAGCACGTCGCAGATTCTGG 14220095
Query 124243 GAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCG 124302
| |||||||| | ||||||||| | ||| ||| | ||| ||| || ||| | ||||
Sbjct 14220094 GCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACCAGCGTCGCGTGCTCGCCG 14220035
Query 124303 GCGATTTTCAAGT 124315
|||| || || ||
Sbjct 14220034 GCGAGTTCCAGGT 14220022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002747996800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |