Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 230 4e-55
>seq1
Length=15654088
Score = 230 bits (254), Expect = 4e-55
Identities = 465/680 (68%), Gaps = 10/680 (1%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898
|| ||| || |||||||| || | | |||||| | | | ||| |||||||||||
Sbjct 14219667 CTGGTCGACGGTGAACTGGATAGGCTGGGCGGCAGCTTGGGTGCGCAGGTAGTACATGCC 14219726
Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958
||||| ||||| || ||| ||| | |||||| || | | |||| || | ||||
Sbjct 14219727 CGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTTATCTTGCCCATGGTGGG 14219786
Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017
||| |||||| ||||| || ||||| |||||||||| |||||||| || || || |
Sbjct 14219787 CTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATG-AAGGCGCCGCGGTCAGCCG 14219845
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|||| | || | ||| |||||| |||||||| ||||||||| ||| | |||| |
Sbjct 14219846 CCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTTGTACAGGCGCTTGGTAT 14219905
Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
| || | || | | || || ||| |||||| ||||| || | | || ||
Sbjct 14219906 CCTCGGGGA-TGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGCGATGATGCGGTTCTTC 14219964
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196
| | || ||||| ||| | | || ||| ||| || || ||||||| || |
Sbjct 14219965 ATGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAGCCATGGGTTGACGACC 14220024
Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256
|| || || |||| ||||| | || | | | |||| ||| | || ||||| |
Sbjct 14220025 TGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGCTCGAAGCAC 14220084
Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316
||||||||||| | |||||| | |||||||| ||||||||||| |||| ||||| |||
Sbjct 14220085 TCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACAAGCAGCGAG 14220144
Query 204317 TTGCGCACACCGT-ATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375
||||||||||||| | ||| | || ||| || || |||||| || || |
Sbjct 14220145 TTGCGCACACCGTGCTGCTTGATGTCCGC-CTTGAGCGACTCCCAGTC--CCAGAGCTCC 14220201
Query 204376 G--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433
| || || ||| |||||||||| |||| | |||||| || || || ||||| |
Sbjct 14220202 GACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGACACAGGCGAGCCCTCG 14220261
Query 204434 TACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAG 204493
|| |||| || | | ||| ||||||| ||||||||||| || |||| | |
Sbjct 14220262 TATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCGCACGAGGCGGTCAGGGCGGCGTGG 14220321
Query 204494 TACATGGTCTCAAAGATCTG 204513
|| |||||||||||||||||
Sbjct 14220322 TAGATGGTCTCAAAGATCTG 14220341
Score = 158 bits (174), Expect = 2e-33
Identities = 590/910 (65%), Gaps = 14/910 (2%)
Strand=Plus/Plus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||| |||||||||||||||| |||| || | |||| | || ||||||
Sbjct 14220629 CTCGACGATCTCGGTGCACAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCT 14220688
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||||||||| ||| ||| ||||||| |||||| || | || |||| |||| | ||
Sbjct 14220689 CTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTC 14220748
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATCCCTTGAGACT 205061
| || ||| ||||| | | |||| | ||| | | | || | | ||
Sbjct 14220749 G-AGGATGGCATACCACAGCTTTTGCGCCTTGAGCGTCTTGCGGCCCTTGCCCTCACGCT 14220807
Query 205062 CGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATT 205121
|||| ||| ||||| ||| | || || ||||| ||| || || || || |
Sbjct 14220808 CGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCGTAGCAGTCTGCTAGGCCAGGGCACT 14220867
Query 205122 TTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTCG 205180
||||| ||||| || | ||| | | || ||| |||| || ||| || |||||
Sbjct 14220868 CGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCA-ACCCGCTTCATGAATAGGTCT 14220926
Query 205181 CTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTT 205240
|||||| ||| | || || || ||||| | || | || | || |||||||
Sbjct 14220927 GGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTG 14220986
Query 205241 TTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGC 205299
|| ||| || || || | | |||||||||||||||||| | | | ||| | ||
Sbjct 14220987 CGCAGGTCGAGG-AACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGC 14221045
Query 205300 GCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAG 205359
||| || | |||||| ||||||||||| || || | | | ||||||||| || ||
Sbjct 14221046 GCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAG 14221105
Query 205360 CATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCT 205419
||| ||||| | ||||||| || ||||| |||| | |||| ||||| || |
Sbjct 14221106 CATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCGCG 14221165
Query 205420 CA--CGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCT 205477
| || |||| || | ||| || ||||| | ||||| |||| ||| || |
Sbjct 14221166 GATGCGGTGGATATTG--AGGCCGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTT 14221223
Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCACGA 205536
| || ||| |||||| || ||||| |||||| || |||| ||||| |||||||
Sbjct 14221224 TTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCA-TGTCGACCAGGAAGCACGA 14221282
Query 205537 AGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCG 205596
| ||||| ||| | ||||| |||| |||||| ||||| ||||||| |||||
Sbjct 14221283 CGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTA 14221342
Query 205597 CTT-CTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATAC 205655
||| |||| || |||| ||||| ||||||| ||| | | | ||| || |
Sbjct 14221343 CTTGCTCG-ACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGC 14221401
Query 205656 CTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTGA 205715
| | |||| | ||||| | ||| || || | ||| | | | | ||| | |||||
Sbjct 14221402 CGACAGCGACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGA 14221461
Query 205716 GCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAGTTGAAGGTGTAGTCCCTAGAAT 205775
|||| || | | ||| ||||| || | |||| | | || || |||||| ||
Sbjct 14221462 GCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAGTCCCGGTCAT 14221521
Query 205776 AGTCGATGGC 205785
|| |||||||
Sbjct 14221522 AGACGATGGC 14221531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154404844800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |