Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq1 260 2e-64
seq67 138 1e-27
seq34 134 2e-26
>seq1
Length=15654088
Score = 260 bits (288), Expect = 2e-64
Identities = 435/626 (69%), Gaps = 6/626 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| || || ||||| |||| ||| || || || || |||| ||||| || ||||||||
Sbjct 14626612 TCAAAGTCCTCACCGCCCAGGTGGGTGTCGCCGGCAGTCGACTTGACCTCGAAGATACCC 14626553
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | ||| |||||||| ||||| ||||| || || ||||| || |||
Sbjct 14626552 TCCTCAATGGTCAGGAGCGACACATCAAAGGTACCGCCACCAAGATCGAAAATCAGGACG 14626493
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| ||||||||||| ||||| || ||||| || || ||
Sbjct 14626492 TTGCGCTCGCCCTCGACTTTCTTGTCGAGACCGTAGGCGATGGCAGCCGCGGTGGGCTCG 14626433
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||||||||| || || | || || || || || || ||
Sbjct 14626432 TTGATGATGCGCAGGACGTTCAGGCCGGCGATCAGACCAGCGTCCTTGGTGGCCTGGCGC 14626373
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || | ||| |||| | || | ||||||
Sbjct 14626372 TGGGAGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCGTTGTTAACGGTGCCACCGAGG 14626313
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || ||| ||||| || ||||| ||||| ||||| || | |
Sbjct 14626312 TAGGACTCGGCCGTCTCGCGCATCTTGGTCAGGACCATGGATGAGATCTCCTCGGGGGTG 14626253
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
||||| ||| || || || || || || || | | ||| || |||| || | |
Sbjct 14626252 AACTGCTTCTGCTCGCCCTTGAACTCGACCTCGACGACGGGCTT-GCCGCCGCGC--TCG 14626196
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| ||||| | | | | ||||| ||| | ||||||| ||| ||||| |
Sbjct 14626195 ATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGTTGAACTTGCGG 14626136
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| || ||||| || || || || ||||| ||||||||||||| ||||||||
Sbjct 14626135 CCGATCAGGCGCTTGGCGTCGAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTG 14626076
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || ||||| |||||| |||||||||| ||
Sbjct 14626075 GCGGCATCTCCAATGAGACGCTC---CGTGTCTGTAAAGGCGACGAACGATGGGGTTGTG 14626019
Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082
|| || || |||||||| || |||||
Sbjct 14626018 CGGTTGCCCTGGTCGTTGGCGATAAT 14625993
>seq67
Length=2709248
Score = 138 bits (152), Expect = 1e-27
Identities = 246/356 (69%), Gaps = 5/356 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| || ||||| | || ||||| || || || || ||| || || | ||
Sbjct 393042 TCGAAATCCTCGCCACCAAGATGGGTATCACCGGCAGTAGCCAGGACCTCGAAAACGCCG 393101
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | ||||||||| || |||||||| ||||| || | | || |
Sbjct 393102 TTGTCGATCGACAGGAGCGAAACATCGAAAGTACCACCGCCCAGATCGTACACGACGATC 393161
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| | | ||| | || | ||| || || |||||||||||||| ||||| || || ||
Sbjct 393162 TGCTTCTCGCCCTCAGT---CTTGTCCAGGCCGTACGCGATAGCGGCCGCAGTGGGCTCG 393218
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|| | ||||| ||| |||||| || || || | |||| || || || || || || |
Sbjct 393219 TTGACGATACGGAGAACGTTCAGACCGGCGAT-GATGCCGGCGTCCTTGGTAGCCTGCCT 393277
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| ||||||||||| || || ||||| |||| ||||| ||||| |||||
Sbjct 393278 CTGGTTGTCGTTGAAGTAGGCCGGAACGGTGACGACGGCGTGTGTGACCTTCTTGCCGAG 393337
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811
|| || || |||| ||| ||||| ||| || | ||| | |||| ||| ||||
Sbjct 393338 GTAGGACTCGGCGACATCCTTCATCTTGCCCAGGATCATGGCGGAAACCTCCTCAG 393393
>seq34
Length=5620442
Score = 134 bits (148), Expect = 2e-26
Identities = 494/765 (65%), Gaps = 19/765 (2%)
Strand=Plus/Minus
Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085
|||| || || | ||| || || || || |||||||||||||| || | || | || |
Sbjct 2668432 CGGCCTGAACAGCCGCACCATAGGCCACAGCCTCATCGGGGTTGATGCTCTTCTCGAGCT 2668373
Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145
|| |||| || | || || | || | || || ||||| || ||||| || |
Sbjct 2668372 TCTTGCCGTCGAAGAACTCGGACAGCAGCTTCTGGATACGGGGGATACGGGTCGAGCCGC 2668313
Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTT 7205
|||||| ||||| || | || ||| || ||||| | ||| ||| |
Sbjct 2668312 CGACCAGGACGATCTCGTCAACAGCCGACTTCTCGATAGCGGCGTCCTTAAGAACCTGGG 2668253
Query 7206 CGACAGGTTCCATA---CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC 7262
||||||| || | | | ||| ||| | | ||| |||||||| | ||||
Sbjct 2668252 CGACAGGCTCGAGAGTGCCCTTA---AACGCGGCGGCGTTCAGCTCCTCAAACCTAGCAC 2668196
Query 7263 GGGTAATGGATGTA--TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320
||||||| || | | ||| || |||||||| | | ||| || || |||||||| ||
Sbjct 2668195 GGGTAATC--TGCAGGTTGAAGTCCTCGCCGTCGAAGAGCGAGTCGATCTCAATGGTGGT 2668138
Query 7321 TTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378
|| || ||| | | | | || | ||| || ||||| || || || | | | |||
Sbjct 2668137 CTGGGCACCGTTGGACAGA--GTCCTCTTGGCACGCTCGCAAGCGGTCCTGAGCCTACGG 2668080
Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438
|| ||||| | | || || | || ||||| || || | || || | | ||
Sbjct 2668079 AGCGCACGGGCATCGCCCGACAGGTCCTTCTTGGTCTTGCGCTGGAAGTCCTTCTTGCAG 2668020
Query 7439 TG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497
|| |||| |||| ||| |||||||| | ||||||| ||| || || || ||||| ||
Sbjct 2668019 TGGTCGA-GGAGGTTCGTGTCGAAATCCTGGCCACCCAGGTGGGTGTCACCAGCGGTGGC 2667961
Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557
||||| || | ||| || | ||||| | | ||| ||||| || |||||||| ||
Sbjct 2667960 CTTGACGGTGAAAACACCACCCTGGATGTTCAGGAGCGAGACATCGAAGGTACCACCGCC 2667901
Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGC 7614
|||||| |||| || ||||| || | ||| ||| | | |||||||| ||
Sbjct 2667900 CAGGTCGTAAATCAGAACGTTGCGCTCCTTGTCCGACTTGCCGGCACCCAGACCGTAGGC 2667841
Query 7615 GATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGC 7674
||| || || || || || || || || ||||| || ||||||||||| || | |
Sbjct 2667840 GATGGCAGCAGCAGTGGGCTCGTTGATGATACGGAGGACGTTCAGGCCAGAGATGGCGCC 2667781
Query 7675 CGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734
|| || || || | || || || ||||| || || ||||| || || | ||| ||
Sbjct 2667780 GGCGTCCTTGGTGGACTGACGCTGGTTGTCGTTGAAATAAGCCGGCACAGTGATGACAGC 2667721
Query 7735 GTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779
| | || ||||| || || | | || || || || |||||
Sbjct 2667720 CTTCTCAACCTTCTTGCCAAGCTTGGCCTCGGCAATCTCCTTCAT 2667676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132164867200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |