Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 260 2e-64 seq67 138 1e-27 seq34 134 2e-26 >seq1 Length=15654088 Score = 260 bits (288), Expect = 2e-64 Identities = 435/626 (69%), Gaps = 6/626 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || ||||| |||| ||| || || || || |||| ||||| || |||||||| Sbjct 14626612 TCAAAGTCCTCACCGCCCAGGTGGGTGTCGCCGGCAGTCGACTTGACCTCGAAGATACCC 14626553 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | ||| |||||||| ||||| ||||| || || ||||| || ||| Sbjct 14626552 TCCTCAATGGTCAGGAGCGACACATCAAAGGTACCGCCACCAAGATCGAAAATCAGGACG 14626493 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| ||||||||||| ||||| || ||||| || || || Sbjct 14626492 TTGCGCTCGCCCTCGACTTTCTTGTCGAGACCGTAGGCGATGGCAGCCGCGGTGGGCTCG 14626433 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || || || || ||||||||| || || | || || || || || || || Sbjct 14626432 TTGATGATGCGCAGGACGTTCAGGCCGGCGATCAGACCAGCGTCCTTGGTGGCCTGGCGC 14626373 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || | ||| |||| | || | |||||| Sbjct 14626372 TGGGAGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCGTTGTTAACGGTGCCACCGAGG 14626313 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || || | || ||| ||||| || ||||| ||||| ||||| || | | Sbjct 14626312 TAGGACTCGGCCGTCTCGCGCATCTTGGTCAGGACCATGGATGAGATCTCCTCGGGGGTG 14626253 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| ||| || || || || || || || | | ||| || |||| || | | Sbjct 14626252 AACTGCTTCTGCTCGCCCTTGAACTCGACCTCGACGACGGGCTT-GCCGCCGCGC--TCG 14626196 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || ||||| | | | | ||||| ||| | ||||||| ||| ||||| | Sbjct 14626195 ATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGTTGAACTTGCGG 14626136 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || ||||| || || || || ||||| ||||||||||||| |||||||| Sbjct 14626135 CCGATCAGGCGCTTGGCGTCGAAGACGGTGTTGATGGGGTTCATGGCGACCTGGTTCTTG 14626076 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || ||||| |||||| |||||||||| || Sbjct 14626075 GCGGCATCTCCAATGAGACGCTC---CGTGTCTGTAAAGGCGACGAACGATGGGGTTGTG 14626019 Query 8057 CGATTCCCTTGGTCGTTCGCAATAAT 8082 || || || |||||||| || ||||| Sbjct 14626018 CGGTTGCCCTGGTCGTTGGCGATAAT 14625993 >seq67 Length=2709248 Score = 138 bits (152), Expect = 1e-27 Identities = 246/356 (69%), Gaps = 5/356 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| || ||||| | || ||||| || || || || ||| || || | || Sbjct 393042 TCGAAATCCTCGCCACCAAGATGGGTATCACCGGCAGTAGCCAGGACCTCGAAAACGCCG 393101 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | | ||||||||| || |||||||| ||||| || | | || | Sbjct 393102 TTGTCGATCGACAGGAGCGAAACATCGAAAGTACCACCGCCCAGATCGTACACGACGATC 393161 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | | ||| | || | ||| || || |||||||||||||| ||||| || || || Sbjct 393162 TGCTTCTCGCCCTCAGT---CTTGTCCAGGCCGTACGCGATAGCGGCCGCAGTGGGCTCG 393218 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695 || | ||||| ||| |||||| || || || | |||| || || || || || || | Sbjct 393219 TTGACGATACGGAGAACGTTCAGACCGGCGAT-GATGCCGGCGTCCTTGGTAGCCTGCCT 393277 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || ||||| ||||||||||| || || ||||| |||| ||||| ||||| ||||| Sbjct 393278 CTGGTTGTCGTTGAAGTAGGCCGGAACGGTGACGACGGCGTGTGTGACCTTCTTGCCGAG 393337 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 || || || |||| ||| ||||| ||| || | ||| | |||| ||| |||| Sbjct 393338 GTAGGACTCGGCGACATCCTTCATCTTGCCCAGGATCATGGCGGAAACCTCCTCAG 393393 >seq34 Length=5620442 Score = 134 bits (148), Expect = 2e-26 Identities = 494/765 (65%), Gaps = 19/765 (2%) Strand=Plus/Minus Query 7026 CGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTT 7085 |||| || || | ||| || || || || |||||||||||||| || | || | || | Sbjct 2668432 CGGCCTGAACAGCCGCACCATAGGCCACAGCCTCATCGGGGTTGATGCTCTTCTCGAGCT 2668373 Query 7086 CTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCAC 7145 || |||| || | || || | || | || || ||||| || ||||| || | Sbjct 2668372 TCTTGCCGTCGAAGAACTCGGACAGCAGCTTCTGGATACGGGGGATACGGGTCGAGCCGC 2668313 Query 7146 CGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTT 7205 |||||| ||||| || | || ||| || ||||| | ||| ||| | Sbjct 2668312 CGACCAGGACGATCTCGTCAACAGCCGACTTCTCGATAGCGGCGTCCTTAAGAACCTGGG 2668253 Query 7206 CGACAGGTTCCATA---CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC 7262 ||||||| || | | | ||| ||| | | ||| |||||||| | |||| Sbjct 2668252 CGACAGGCTCGAGAGTGCCCTTA---AACGCGGCGGCGTTCAGCTCCTCAAACCTAGCAC 2668196 Query 7263 GGGTAATGGATGTA--TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 ||||||| || | | ||| || |||||||| | | ||| || || |||||||| || Sbjct 2668195 GGGTAATC--TGCAGGTTGAAGTCCTCGCCGTCGAAGAGCGAGTCGATCTCAATGGTGGT 2668138 Query 7321 TTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || ||| | | | | || | ||| || ||||| || || || | | | ||| Sbjct 2668137 CTGGGCACCGTTGGACAGA--GTCCTCTTGGCACGCTCGCAAGCGGTCCTGAGCCTACGG 2668080 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAG 7438 || ||||| | | || || | || ||||| || || | || || | | || Sbjct 2668079 AGCGCACGGGCATCGCCCGACAGGTCCTTCTTGGTCTTGCGCTGGAAGTCCTTCTTGCAG 2668020 Query 7439 TG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 || |||| |||| ||| |||||||| | ||||||| ||| || || || ||||| || Sbjct 2668019 TGGTCGA-GGAGGTTCGTGTCGAAATCCTGGCCACCCAGGTGGGTGTCACCAGCGGTGGC 2667961 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 ||||| || | ||| || | ||||| | | ||| ||||| || |||||||| || Sbjct 2667960 CTTGACGGTGAAAACACCACCCTGGATGTTCAGGAGCGAGACATCGAAGGTACCACCGCC 2667901 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT---TTGTTCTTATCGAGACCGTACGC 7614 |||||| |||| || ||||| || | ||| ||| | | |||||||| || Sbjct 2667900 CAGGTCGTAAATCAGAACGTTGCGCTCCTTGTCCGACTTGCCGGCACCCAGACCGTAGGC 2667841 Query 7615 GATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGC 7674 ||| || || || || || || || || ||||| || ||||||||||| || | | Sbjct 2667840 GATGGCAGCAGCAGTGGGCTCGTTGATGATACGGAGGACGTTCAGGCCAGAGATGGCGCC 2667781 Query 7675 CGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 || || || || | || || || ||||| || || ||||| || || | ||| || Sbjct 2667780 GGCGTCCTTGGTGGACTGACGCTGGTTGTCGTTGAAATAAGCCGGCACAGTGATGACAGC 2667721 Query 7735 GTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 | | || ||||| || || | | || || || || ||||| Sbjct 2667720 CTTCTCAACCTTCTTGCCAAGCTTGGCCTCGGCAATCTCCTTCAT 2667676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132164867200