Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12 118 1e-21 >seq12 Length=9596913 Score = 118 bits (130), Expect = 1e-21 Identities = 282/418 (67%), Gaps = 15/418 (4%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 ||| ||| |||||||| || || || | |||||||| ||| || ||||| |||||| Sbjct 8048784 TGTTGAAGCCGTCCATCTCGGTCAGGATCTGGTTGAGCGTGGCCTCGCGCTCGTCGTTGC 8048725 Query 11648 AGGGCATACCACCTGCCGAA----CGCTTCTTACCGACAGCGTCAATCTCATCGATGAAT 11703 | | ||| ||| | ||| ||| |||| ||||| ||||| |||||||| Sbjct 8048724 CGCCGA-ACCGGTGGCCCGAGTCGCGCGACTTGCCGATGGCGTCGATCTCGTCGATGAAG 8048666 Query 11704 ACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCA 11763 | ||| ||||| ||| ||| |||| |||| || || || || ||| ||| || Sbjct 8048665 ATGATGCACGGCGCGTTCTTACGCGCCTCGGCGAACAGGTCCCGCACCCGCGACGCGCCC 8048606 Query 11764 ACACCTACGAACATCTCAACGAAGTTTGCG--GCAGAACACTGAATGAAGGGAACATTAG 11821 || || || |||||||| ||||| | | | || || | ||||| |||||| || | | Sbjct 8048605 ACGCCCACAAACATCTCGACGAACTCGGAGCCGCTGA-CGCTGAA-GAAGGGCACCTCGG 8048548 Query 11822 ACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAA 11881 |||| || || | || || || || ||||| ||||| || || | || | || | Sbjct 8048547 ACTCGCCCGCCGTCGCCTTGGCCAGCAGCGTCTTGCCCGTGCCGGGCGGGCCCGACAGGA 8048488 Query 11882 GGGCGCCACGGGGGATCTTGGCACCA--CTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGA 11938 |||||| || |||||||| || || |||| |||| | ||| ||| ||||||||| Sbjct 8048487 TGGCGCCGCGCGGGATCTTAGCCCCGAGCTTCTCAAACTT---CTCGGGCGTCTTGAGGA 8048431 Query 11939 AGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || || | ||| ||| ||| |||||| ||| || ||| | || || | ||| Sbjct 8048430 AGCTGACGAACTCGACAATCTCCAGCTTGGCCTCGTCCATGCCCGCCACGTCCGAGAA 8048373 Score = 86.0 bits (94), Expect = 7e-12 Identities = 144/205 (70%), Gaps = 5/205 (2%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || |||||||||||||| || |||| ||| || Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||| || || | ||||| ||||| ||||||| ||| || |||||||| Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTCG---A 119670 ||||| || ||| || || | || ||| || ||||||||| ||||||| | Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGC-GAGGCAAAGGTCGACTTCTTGTCGGAAA 6218717 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695 |||||| | |||||||| |||||| Sbjct 6218718 TCCACTTCAAAGCCCAGTCGGCCTT 6218742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975411024000