Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq12 118 1e-21
>seq12
Length=9596913
Score = 118 bits (130), Expect = 1e-21
Identities = 282/418 (67%), Gaps = 15/418 (4%)
Strand=Plus/Minus
Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647
||| ||| |||||||| || || || | |||||||| ||| || ||||| ||||||
Sbjct 8048784 TGTTGAAGCCGTCCATCTCGGTCAGGATCTGGTTGAGCGTGGCCTCGCGCTCGTCGTTGC 8048725
Query 11648 AGGGCATACCACCTGCCGAA----CGCTTCTTACCGACAGCGTCAATCTCATCGATGAAT 11703
| | ||| ||| | ||| ||| |||| ||||| ||||| ||||||||
Sbjct 8048724 CGCCGA-ACCGGTGGCCCGAGTCGCGCGACTTGCCGATGGCGTCGATCTCGTCGATGAAG 8048666
Query 11704 ACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCA 11763
| ||| ||||| ||| ||| |||| |||| || || || || ||| ||| ||
Sbjct 8048665 ATGATGCACGGCGCGTTCTTACGCGCCTCGGCGAACAGGTCCCGCACCCGCGACGCGCCC 8048606
Query 11764 ACACCTACGAACATCTCAACGAAGTTTGCG--GCAGAACACTGAATGAAGGGAACATTAG 11821
|| || || |||||||| ||||| | | | || || | ||||| |||||| || | |
Sbjct 8048605 ACGCCCACAAACATCTCGACGAACTCGGAGCCGCTGA-CGCTGAA-GAAGGGCACCTCGG 8048548
Query 11822 ACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAA 11881
|||| || || | || || || || ||||| ||||| || || | || | || |
Sbjct 8048547 ACTCGCCCGCCGTCGCCTTGGCCAGCAGCGTCTTGCCCGTGCCGGGCGGGCCCGACAGGA 8048488
Query 11882 GGGCGCCACGGGGGATCTTGGCACCA--CTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGA 11938
|||||| || |||||||| || || |||| |||| | ||| ||| |||||||||
Sbjct 8048487 TGGCGCCGCGCGGGATCTTAGCCCCGAGCTTCTCAAACTT---CTCGGGCGTCTTGAGGA 8048431
Query 11939 AGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996
|| || | ||| ||| ||| |||||| ||| || ||| | || || | |||
Sbjct 8048430 AGCTGACGAACTCGACAATCTCCAGCTTGGCCTCGTCCATGCCCGCCACGTCCGAGAA 8048373
Score = 86.0 bits (94), Expect = 7e-12
Identities = 144/205 (70%), Gaps = 5/205 (2%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || || || |||||||||||||| || |||| ||| ||
Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||| || || | ||||| ||||| ||||||| ||| || ||||||||
Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTCG---A 119670
||||| || ||| || || | || ||| || ||||||||| ||||||| |
Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGC-GAGGCAAAGGTCGACTTCTTGTCGGAAA 6218717
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTT 119695
|||||| | |||||||| ||||||
Sbjct 6218718 TCCACTTCAAAGCCCAGTCGGCCTT 6218742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975411024000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |