Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 4e-22
seq12 96.9 4e-15
>seq1
Length=15654088
Score = 120 bits (132), Expect = 4e-22
Identities = 607/946 (64%), Gaps = 30/946 (3%)
Strand=Plus/Plus
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
|||| ||| || || || | || |||| ||||| |||||| |||||| | |
Sbjct 14220567 GACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGCCACCTCATCGGGCGC-GA 14220625
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | || || || |||| ||| || || || || |||| ||||| |||||
Sbjct 14220626 GTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTT 14220685
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
||||| |||||| || ||||| |||||| |||| | || ||||| ||||| |
Sbjct 14220686 GCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGC 14220745
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAA-TGGCGTTGGCCCGT-CCCTC 106683
|| ||| || || | ||||| | | ||| || | | | ||| |||| | |||||
Sbjct 14220746 CTCGAGGATGGCATACCACAGCTTTTGCGCCTTGAGCGTCTTGCG---GCCCTTGCCCTC 14220802
Query 106684 CGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGG 106743
|||||||||| ||| | || || ||||| || || ||| | || || ||
Sbjct 14220803 ACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCGTAGCAGTCTGCTAGGCCAGG 14220862
Query 106744 TGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAG 106803
|| || || || | || | ||| | || || |||||||||||||||||| ||
Sbjct 14220863 GCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAG 14220922
Query 106804 GTCTGGAATCCACAGGG--ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGG 106861
|||||| ||||| |||| | |||| || || | || ||| || | || |||
Sbjct 14220923 GTCTGGGATCCATAGGGCCAGGAAA--AGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGG 14220980
Query 106862 TTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCG 106921
|| || | || |||||||| | | || |||||||| ||||| ||||||| ||
Sbjct 14220981 TTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCA 14221040
Query 106922 ATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATAC 106977
| | || | | | | ||| | || | || || || || ||| ||| || ||
Sbjct 14221041 AAGGCGCCGGGGCGCTTGTTG-CCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAAC 14221099
Query 106978 GCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTA 107035
|| ||||| || | || || | ||| || || || || ||| || |||
Sbjct 14221100 ACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAG--CCC 14221157
Query 107036 TTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCA 107095
|||| | | ||||| | | || ||||| || ||| ||| ||||| |||
Sbjct 14221158 GTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCATGGCA 14221217
Query 107096 CACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAG 107155
|| | || || | |||||||| | ||| ||| ||||| || ||| ||||||
Sbjct 14221218 CAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAGGAAG 14221277
Query 107156 CAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAAT 107214
|| |||| ||| || || || || || || |||||||| || || | ||||| |
Sbjct 14221278 CACGACGACAGCTG-GGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGT 14221336
Query 107215 GAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 107272
||| || |||| ||||| || ||| ||||| | || || |||| || ||
Sbjct 14221337 GAA-GTA-CTTGCTCGACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCC 14221394
Query 107273 TGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCG 107332
|||||||| || || ||||| | ||||| ||||| || | || |||| |||
Sbjct 14221395 CAGATGCCGACAGCGACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCG 14221454
Query 107333 AGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
||| |||| || || ||| ||||| |||| ||||||||
Sbjct 14221455 AGC--TTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCCAAAGTA 14221498
>seq12
Length=9596913
Score = 96.9 bits (106), Expect = 4e-15
Identities = 148/210 (70%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| ||| ||| |||||||| || || || || || || || |||||| |||||
Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||| || || |||||||||| ||| | || | | || | ||| |||||||||
Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449
|||||| || ||||| |||| || ||| ||| |||| ||||| ||||
Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGCGAGGCAAAGG---TCGACTTCTTGTCGGA 6218715
Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTT 117479
|| ||| |||| ||||| | ||||||||
Sbjct 6218716 AATCCACTTCAAAGCCCAGTCGGCCTTCTT 6218745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980210019200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |