Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq45 118 9e-22 >seq45 Length=5506958 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 || ||||| | |||||| | ||||||||| || ||| | || ||||| || | |||| Sbjct 4038716 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 4038657 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29886 ||||| ||||| |||| | |||| | | || || | || || | |||| || Sbjct 4038656 ACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCGCAGGCGTGGGCG 4038597 Query 29887 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCC 29946 | ||||| ||| || || |||||||| |||||||| ||||| || || || |||||||| Sbjct 4038596 AGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGGCCCATGTCG 4038537 Query 29947 CCCGACCTCTGGTAGAGCTGACA 29969 | |||| |||||||||||| || Sbjct 4038536 CAGGACCGCTGGTAGAGCTGGCA 4038514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617201597840