Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 363 3e-95
seq12 150 3e-31
>seq1
Length=15654088
Score = 363 bits (402), Expect = 3e-95
Identities = 835/1232 (68%), Gaps = 64/1232 (5%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|||||||| |||||||||||||||||||||||| ||||||||| ||| | ||||||||
Sbjct 14220307 GTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCGCGAGCCTCGGG 14220365
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
||| |||||||| |||||| | ||| | |||||||| ||||| || || | ||
Sbjct 14220366 AGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCC 14220425
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
|||||||| ||| | | |||| | || | || |||| |||| || ||||||||
Sbjct 14220426 GATGGGCCGGTGGCGCAGGTTGCTGTTACGAGC-CTCCTGGACCGGG-TAGTAGTTGACG 14220483
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| || || || || ||| | ||||||| ||||||| ||
Sbjct 14220484 TCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAG 14220543
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAA-GCGTTTAGGGCAACGCT 221712
| || | | |||| |||| | | || ||||| ||| | |||||
Sbjct 14220544 T-------CA--TAGGCGCCCTCGTTGTAG---TCGACAAACTGCGGCAGCGCCAACGAC 14220591
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
| ||||||| ||||| |||||||| || | | |||| | |||||| || || ||
Sbjct 14220592 G-CCAGGTTGCACACAGCCACCTCATCGG-GCGCGAGTACTCGACGATCTCGGTGCACAG 14220649
Query 221773 GTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-T 221828
||| ||||| |||||| ||||||| || || || |||||| ||| ||| | |
Sbjct 14220650 GTTAGAGCTGCG---GATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGGT 14220705
Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888
| ||||| ||||| ||||| ||||||||| ||| ||| | || || | ||| |
Sbjct 14220706 CTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACA 14220765
Query 221889 GTTCTCTGGCGC--TCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCC 221940
| || | |||| | | |||| | |||| | ||| |||| |||||| |||
Sbjct 14220766 G--CTTTTGCGCCTTGAGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTAC-- 14220821
Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000
| ||| | | |||| || ||||| || | ||||| || ||| | |||
Sbjct 14220822 -----AAAGCCT--CGAACTCGTCGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGG 14220874
Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060
||||| || |||||| ||| | | |||| || |||||| ||||| ||||||||
Sbjct 14220875 GCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCA 14220934
Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120
|| ||| | || || || | || || ||||||| ||||| ||| || | ||| ||
Sbjct 14220935 TAGGGCCAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTC 14220994
Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180
| ||||| || | ||| |||||||||||||||||||||| ||| | |||||||| ||
Sbjct 14220995 GAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCG 14221054
Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTAC 222240
||||||||||||||| || || | || |||||| | || || | || ||
Sbjct 14221055 CTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCAC 14221114
Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300
| ||||||||| ||||||||||| ||||| | || ||| | || | |
Sbjct 14221115 GATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCGC---GGATGC- 14221170
Query 222301 GGCAGACAT----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356
|| || || ||||||||| ||||| || ||||||||||| ||| | ||||| |
Sbjct 14221171 GGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGG 14221230
Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416
|||| ||| || || || ||| ||||| | || | ||| || || ||||||| ||
Sbjct 14221231 TGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGCT 14221290
Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476
| | | || | | |||||| || || |||||| |||||| || ||||| || |
Sbjct 14221291 GGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTACTTGCTCG 14221350
Query 222477 ACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCG 222535
|||| || | ||||||||| | || | |||||||||| ||| || | | | |||
Sbjct 14221351 ACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCCG-ACAGCG 14221409
Query 222536 CATCTCATGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGG 222592
| |||| ||||| |||||| | ||| || | | || | ||||| |||||||
Sbjct 14221410 ACGCGCATGATCATGTGCTGGGGGCGCTCGAC-GATCTTGCCGTCGAGCT--TGAGCAGG 14221466
Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624
||||| ||||| |||||||| ||||||||
Sbjct 14221467 TACGAGCGCTCCAGGGTCTTGAAGCCAAAGTA 14221498
Score = 122 bits (134), Expect = 2e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | |||||| | | |||||| | ||| || ||| | ||
Sbjct 14220015 GTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGG 14220074
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || ||||||||||||||| ||||| | ||||||||||||||||||||| |||||
Sbjct 14220075 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCAC 14220134
Query 221236 CAGCAGACTGTTGCGCA 221252
||||| ||||||||
Sbjct 14220135 AAGCAGCGAGTTGCGCA 14220151
>seq12
Length=9596913
Score = 150 bits (166), Expect = 3e-31
Identities = 344/519 (66%), Gaps = 16/519 (3%)
Strand=Plus/Minus
Query 25810 CCCA-GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTAC 25868
|||| ||||| | |||||| ||||| |||||||||| | | ||| | ||
Sbjct 6218758 CCCATGCATCCGTAAGAAGGCCGACTGGGCTTTGAAGTGGATTTCCGACAAGAAGTCGAC 6218699
Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928
|||| | |||||| | |||||||| || || ||||| ||||| ||||||||| | ||
Sbjct 6218698 CTTTGCCTCGCGGCTCATTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTT 6218639
Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988
||| ||||||||||||| ||| || || ||||| || || ||| ||||||||
Sbjct 6218638 TGCCTCCATCTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGCCTTACCTTCTCCAACGA 6218579
Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048
||||||| | ||||||||||| |||| || ||||||||||| |||| | | |||
Sbjct 6218578 GCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTTCTCTTCTC---CCA 6218522
Query 26049 CTTGCTCCACAAACCTTC---TCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGG 26104
| || | |||| | |||| | | || | |||||| || |||||
Sbjct 6218521 CATG----AAGAACCGGCCCAGCAAGCAAATGATCGAGGAGATCATCGTCGATGCTGTCA 6218466
Query 26105 AGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACA 26164
|||||||| | ||||| | | ||||||||| |
Sbjct 6218465 AGATCGAGCAAGAGTTCCTGACCGAGGCCCTGCCTTGTGCGCTGCTCGGCATGAACTCGA 6218406
Query 26165 GACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACT 26222
||||||| || ||||| |||| ||||| |||| || ||| ||| | |||| |
Sbjct 6218405 ACCTCATGAAGCAGTACATCGAGTTCGTGGCAGACCGCCTCCTGGTTGCTCTC-GGGAAT 6218347
Query 26223 CGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGG 26282
| || ||||| | | | ||||| |||||||| ||||| ||||| || ||| ||
Sbjct 6218346 -GACAAGGTCTACCGCGCATCCAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGCGG 6218288
Query 26283 GAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||||||||||||| |||||| | || ||||| || ||
Sbjct 6218287 CAAGACCAACTTCTTCGAAAAGCGCGTGGGCGAGTACCA 6218249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928843871155200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |