Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 257 2e-63 seq34 167 3e-36 seq23 167 3e-36 seq67 161 1e-34 >seq1 Length=15654088 Score = 257 bits (284), Expect = 2e-63 Identities = 466/678 (69%), Gaps = 3/678 (0%) Strand=Plus/Plus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||||||| | || ||||| || ||||| ||||| ||||||| ||| ||||||||||| | Sbjct 14625991 AGATTATCGCCAACGACCAGGGCAACCGCACAACCCCATCGTTCGTCGCCTTTACAGACA 14626050 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 || |||||| ||||||||||||| || || ||| || |||||||| ||||| || | Sbjct 14626051 CGGAGCGTCTCATTGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCG 14626110 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 |||| ||||| ||||| || || || |||||||| || | ||||| | ||| | Sbjct 14626111 TCTTCGACGCCAAGCGCCTGATCGGCCGCAAGTTCAACGACGCCGAGGTCCAGGCCGACA 14626170 Query 195543 TAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTG 195602 | ||| ||| | | | ||| | | | | | ||| | ||||| | | | || | Sbjct 14626171 TGAAGCACTTCCCCT-TCAAGGTCAT-CGAGCGCGGC-GGCAAGCCCGTCGTCGAGGTCG 14626227 Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 | || | || ||| |||| || || | ||||| || || || || ||||| ||| | Sbjct 14626228 AGTTCAAGGGCGAGCAGAAGCAGTTCACCCCCGAGGAGATCTCATCCATGGTCCTGACCA 14626287 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| ||||| || || || | | | ||| || || || | || || | || | Sbjct 14626288 AGATGCGCGAGACGGCCGAGTCCTACCTCGGTGGCACCGTTAACAACGCCGTCATCACCG 14626347 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || || ||||| || |||||||||| | || || | Sbjct 14626348 TCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCTGGTCTGATCGCCG 14626407 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || |||||||| || || || ||||| | Sbjct 14626408 GCCTGAACGTCCTGCGCATCATCAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTCG 14626467 Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902 ||||||| || | || || || |||| || ||||| ||||| ||||| |||| Sbjct 14626468 ACAAGAAAGTCGAGGGCGAGCGCAACGTCCTGATTTTCGATCTTGGTGGCGGTACCTTTG 14626527 Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962 |||| || || || | ||||| | ||||| ||||| || ||| | ||||| || || | Sbjct 14626528 ATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCGACTGCCGGCGACA 14626587 Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCC 196022 | || || || ||||| || || || || || || || || | |||||||| Sbjct 14626588 CCCACCTGGGCGGTGAGGACTTTGACAACCGCCTGGTCACCCACTTCGTTAATGAGTTCA 14626647 Query 196023 GTCGAAAGAATAAGAAAG 196040 |||||| | || |||| Sbjct 14626648 AGCGAAAGCACAAAAAAG 14626665 Score = 143 bits (158), Expect = 4e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||||||||| || || ||||| || ||||| ||||| || ||||| || Sbjct 11956503 CTTCGTGAAGACCCTTACTGGCAAGACCATCACTCTGGAGGTCGAGTCCTCGGACACGAT 11956444 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| || | || ||||||| || || ||||| ||||| || ||||| ||||| || || Sbjct 11956443 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCT 11956384 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 ||||| ||||| || |||||||| ||||| || || || | || |||||| | || || Sbjct 11956383 CATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGGACTCTGTCCGACTACAACATCCAGAA 11956324 Query 172050 GG 172051 || Sbjct 11956323 GG 11956322 >seq34 Length=5620442 Score = 167 bits (184), Expect = 3e-36 Identities = 513/786 (65%), Gaps = 18/786 (2%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || ||||| |||| || || || ||| | || |||||||| | || || Sbjct 2667730 ACTGTGCCGGCTTATTTCAACGACAACCAGCGTCAGTCCACCAAGGACGCCGGCGCCATC 2667789 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || || ||| || | || ||||| || || || || ||||| || || || ||| Sbjct 2667790 TCTGGCCTGAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATCGCCTACGGT 2667849 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 |||| |||| ||| | || || || |||| | || || || |||||| Sbjct 2667850 CTGGGTGCCGGCAAGTCGGACAAGGAGCGCAACGTTCTGATTTACGACCTGGGCGGTGGT 2667909 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || |||||||| || || || || | |||||| | ||| || ||||| || ||| Sbjct 2667910 ACCTTCGATGTCTCGCTCCTGAACATCCAGGGTGGTGTTTTCACCGTCAAGGCCACCGCT 2667969 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT--CTTCTCCGTCATTTGTCTG 196013 ||||| || || || ||||| | |||||||| |||| || ||| || | Sbjct 2667970 GGTGACACCCACCTGGGTGGCCAGGATTTCGA--CACGAACCTCCTCGACCACTGCAAGA 2668027 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | || |||| || |||| ||||| || | || || || | | || || ||| ||| Sbjct 2668028 AGGACTTCCAGCGCAAGACCAAGAAGGACCTGTCGGGCGATGCCCGTGCGCTCCGTAGGC 2668087 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGT 196131 | ||||| || || || |||||||| | ||||| || | |||| | || || | | Sbjct 2668088 TCAGGACCGCTTGCGAGCGTGCCAAGAGGACTCTGTC--CAACGGTGCCCAGACCACCAT 2668145 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA--TACAACTATTACCCGTGCACGT 196189 |||||| || ||| | || ||||| |||||| | | || ||||||||||| | Sbjct 2668146 TGAGATCGACTCGCTCTTCGACGGCGAGGACTTCAACCTGCAG--ATTACCCGTGCTAGG 2668203 Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 ||||| ||| | ||| | | ||||| | | | || ||||| | || || ||| Sbjct 2668204 TTTGAGGAGCTGAACGCCGCCGCGTTTAAGGGCACTCTCGAGCCTGTCGCCCAGGTTCTT 2668263 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||||| || || ||||| ||||| || || ||||| || || || || ||| Sbjct 2668264 AAGGACGCCGCTATCGAGAAGTCGGCTGTTGACGAGATCGTCCTGGTCGGCGGCTCGACC 2668323 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || || || || |||| || |||||| | || | | | || Sbjct 2668324 CGTATCCCCCGTATCCAGAAGCTGCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGAAG 2668383 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | |||||||| ||||| || || || ||||||||||| |||||||| | | |||| || Sbjct 2668384 AGCATCAACCCCGATGAGGCTGTGGCCTATGGTGCGGCTGTTCAGGCCGGTGTTCTTTCG 2668443 Query 196430 GGTGTTGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 || | || | | || | ||||| ||||| || || || || ||| | ||| Sbjct 2668444 GGCAAGGCCACGTCTGCTGACACCAGCGATCTGCTGCTGCTCGACGTCGCCCCCCTGTCC 2668503 Query 196487 CTGGGT 196492 |||||| Sbjct 2668504 CTGGGT 2668509 >seq23 Length=7462253 Score = 167 bits (184), Expect = 3e-36 Identities = 175/229 (76%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| || || || ||||||||||| ||||| |||||| Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| |||| ||| || || ||| Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCA-TCCCCCTGACCAG 7209890 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || ||||| || |||||||| || ||||| || || || | || |||||| Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || |||||||| || || | || || ||||||| Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGTG 7209999 >seq67 Length=2709248 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | ||||||||||| ||||| ||||| || || || || Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || |||||| | || |||||| || |||||||| ||||| || || || ||| Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || ||||| |||||| | | || |||||| Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 |||| |||||||| ||||| ||||| || || Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCT 458464 Score = 143 bits (158), Expect = 4e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || || || || || || ||||| || || || ||||| | Sbjct 458905 GTATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCAT 458846 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 ||||||| ||||| ||| | || | ||||||||||| ||||| || || || || |||| Sbjct 458845 CAGACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATC 458786 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||||| | || ||||| || || ||||| || || || || || || | ||||||| Sbjct 458785 AGCAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACA 458726 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || | || |||||| || || ||| | || || | || || ||||| Sbjct 458725 ACATCCAGAAGGAGAGCACCCTCCACTTGGTGCTTCGTCTGCGCGGTGG 458677 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| ||||| || || || ||||| ||| |||| || Sbjct 459335 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGATACCATCGACAACGTCAAGTCC 459276 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || ||||| ||||| || || || || ||||| || Sbjct 459275 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAG 459216 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || || |||||| | || |||||| | ||||| ||||| || || ||| Sbjct 459215 CAACTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAAGAGTCGACGCTGCAC 459156 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 459155 CTCGTCCTCCGCCTCCGTGGAGGT 459132 Score = 105 bits (116), Expect = 9e-18 Identities = 250/377 (66%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670 || ||| |||| ||| | |||| || || |||| | ||| | || ||||||||| Sbjct 393415 GGCGAGGAGAAGCAACTGTCTCCTGAGGAGGTTTCCGCCATGATCCTGGGCAAGATGAAG 393356 Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 || || || || | | | || || | || | | | || || || || || || || Sbjct 393355 GATGTCGCCGAGTCCTACCTCGGCAAGAAGGTCACACACGCCGTCGTCACCGTTCCGGCC 393296 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || || | ||||| || |||||||| | || || ||||| ||| Sbjct 393295 TACTTCAACGACAACCAGAGGCAGGCTACCAAGGACGCCGGCATCATCGCCGGTCTGAAC 393236 Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 ||| | || |||| || || || ||||| || || || || || |||||||||| Sbjct 393235 GTTCTCCGTATCGTCAACGAGCCCACTGCGGCCGCTATCGCGTACGGCCTGGACAAGACT 393176 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 ||| ||| | | | || || | ||||| || |||||||| || ||||| || Sbjct 393175 GAGGGCGAGAAGCAGATCGTCGTG---TACGATCTGGGCGGTGGTACTTTCGATGTTTCG 393119 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || || || || || | ||||| || ||||||||| |||||||| ||||| Sbjct 393118 CTCCTGTCGATCGACAACGGCGTTTTCGAGGTCCTGGCTACTGCCGGTGATACCCATCTT 393059 Query 195971 GGTGGTGAAGATTTCGA 195987 ||||| || |||||||| Sbjct 393058 GGTGGCGAGGATTTCGA 393042 Score = 100 bits (110), Expect = 4e-16 Identities = 327/506 (65%), Gaps = 8/506 (2%) Strand=Plus/Minus Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 || ||||| ||||| || ||||| | || ||||| || ||||||| | |||| || || Sbjct 392656 ATTAACCCCGATGAGGCTGTTGCGTTCGGCGCGGCTGTCCAGGCTGGTGTTCTGTCTGGC 392597 Query 196433 GTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG-TATCCCTGGG 196491 | || || | | | | | ||| || || | | ||||| | |||| || Sbjct 392596 GAGGAGGGTACTGATGACATTGTTCTCATGG-ACGTCA------ACCCGCTCACCCTTGG 392544 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 | |||| || | || ||||| ||||| || |||| | ||||| |||| || || Sbjct 392543 TATTGAGACCACCGGCGGTGTCATGACCAAGCTTATCCCCCGTAACACTCCTATCCCTAC 392484 Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 ||| || |||| || || |||| || || || | || | || || || Sbjct 392483 CCGCAAGAGCCAGATCTTCTCGACTGCGGCCGACAACCAGCCCGTCGTCCTGATCCAGGT 392424 Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671 | ||| |||||||||||| | ||||| ||| | || || || | ||||| | || Sbjct 392423 CTTTGAGGGAGAACGCTCCATGACCAAGGACAACAACCTCCTGGGCAAGTTCGAGCTTAC 392364 Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731 || || || |||| ||| | || || ||||| | |||| |||||| | || || Sbjct 392363 CGGTATCCCGCCTGCGCCCCGCGGCCAGCCGCAGATCGAGGTTTCCTTCGAGCTTGATGC 392304 Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791 || || || || || || | || | ||||||| ||||||| |||| |||| Sbjct 392303 CAACGGTATCCTGAAGGTGTCGGCCCACGACAAGGGCACTGGCAACACTGAGCAGATCAC 392244 Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851 || | ||| |||||||| || || | ||||||| || || |||||||| || || Sbjct 392243 CATCAACAACGACAAGGGCCGTCTGACCCAGGAGGAGATCGACCGTATGGTCAGCGAGGC 392184 Query 196852 GGAAAAGTACAGGGAAGAAGACGAGG 196877 || |||||| || || ||| ||| Sbjct 392183 TGAGAAGTACGCCGAGGAGGACAAGG 392158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861742137600