Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 257 2e-63
seq34 167 3e-36
seq23 167 3e-36
seq67 161 1e-34
>seq1
Length=15654088
Score = 257 bits (284), Expect = 2e-63
Identities = 466/678 (69%), Gaps = 3/678 (0%)
Strand=Plus/Plus
Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422
|||||||| | || ||||| || ||||| ||||| ||||||| ||| ||||||||||| |
Sbjct 14625991 AGATTATCGCCAACGACCAGGGCAACCGCACAACCCCATCGTTCGTCGCCTTTACAGACA 14626050
Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482
|| |||||| ||||||||||||| || || ||| || |||||||| ||||| || |
Sbjct 14626051 CGGAGCGTCTCATTGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCCATCAACACCG 14626110
Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542
|||| ||||| ||||| || || || |||||||| || | ||||| | ||| |
Sbjct 14626111 TCTTCGACGCCAAGCGCCTGATCGGCCGCAAGTTCAACGACGCCGAGGTCCAGGCCGACA 14626170
Query 195543 TAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTG 195602
| ||| ||| | | | ||| | | | | | ||| | ||||| | | | || |
Sbjct 14626171 TGAAGCACTTCCCCT-TCAAGGTCAT-CGAGCGCGGC-GGCAAGCCCGTCGTCGAGGTCG 14626227
Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662
| || | || ||| |||| || || | ||||| || || || || ||||| ||| |
Sbjct 14626228 AGTTCAAGGGCGAGCAGAAGCAGTTCACCCCCGAGGAGATCTCATCCATGGTCCTGACCA 14626287
Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722
||||| ||||| || || || | | | ||| || || || | || || | || |
Sbjct 14626288 AGATGCGCGAGACGGCCGAGTCCTACCTCGGTGGCACCGTTAACAACGCCGTCATCACCG 14626347
Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782
| || || ||||||| || || || || ||||| || |||||||||| | || || |
Sbjct 14626348 TCCCCGCCTACTTCAACGACTCCCAGCGCCAGGCCACCAAGGACGCTGGTCTGATCGCCG 14626407
Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842
| || ||| || | || ||||| || || || |||||||| || || || ||||| |
Sbjct 14626408 GCCTGAACGTCCTGCGCATCATCAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTCG 14626467
Query 195843 ACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTG 195902
||||||| || | || || || |||| || ||||| ||||| ||||| ||||
Sbjct 14626468 ACAAGAAAGTCGAGGGCGAGCGCAACGTCCTGATTTTCGATCTTGGTGGCGGTACCTTTG 14626527
Query 195903 ATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATA 195962
|||| || || || | ||||| | ||||| ||||| || ||| | ||||| || || |
Sbjct 14626528 ATGTGTCGCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCGACTGCCGGCGACA 14626587
Query 195963 CTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCC 196022
| || || || ||||| || || || || || || || || | ||||||||
Sbjct 14626588 CCCACCTGGGCGGTGAGGACTTTGACAACCGCCTGGTCACCCACTTCGTTAATGAGTTCA 14626647
Query 196023 GTCGAAAGAATAAGAAAG 196040
|||||| | || ||||
Sbjct 14626648 AGCGAAAGCACAAAAAAG 14626665
Score = 143 bits (158), Expect = 4e-29
Identities = 141/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929
||| ||||| ||||||||||| || || ||||| || ||||| ||||| || ||||| ||
Sbjct 11956503 CTTCGTGAAGACCCTTACTGGCAAGACCATCACTCTGGAGGTCGAGTCCTCGGACACGAT 11956444
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| || | || ||||||| || || ||||| ||||| || ||||| ||||| || ||
Sbjct 11956443 CGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCT 11956384
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
||||| ||||| || |||||||| ||||| || || || | || |||||| | || ||
Sbjct 11956383 CATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGGACTCTGTCCGACTACAACATCCAGAA 11956324
Query 172050 GG 172051
||
Sbjct 11956323 GG 11956322
>seq34
Length=5620442
Score = 167 bits (184), Expect = 3e-36
Identities = 513/786 (65%), Gaps = 18/786 (2%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || ||||| |||| || || || ||| | || |||||||| | || ||
Sbjct 2667730 ACTGTGCCGGCTTATTTCAACGACAACCAGCGTCAGTCCACCAAGGACGCCGGCGCCATC 2667789
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
| || || ||| || | || ||||| || || || || ||||| || || || |||
Sbjct 2667790 TCTGGCCTGAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATCGCCTACGGT 2667849
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|||| |||| ||| | || || || |||| | || || || ||||||
Sbjct 2667850 CTGGGTGCCGGCAAGTCGGACAAGGAGCGCAACGTTCTGATTTACGACCTGGGCGGTGGT 2667909
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| || || || || | |||||| | ||| || ||||| || |||
Sbjct 2667910 ACCTTCGATGTCTCGCTCCTGAACATCCAGGGTGGTGTTTTCACCGTCAAGGCCACCGCT 2667969
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT--CTTCTCCGTCATTTGTCTG 196013
||||| || || || ||||| | |||||||| |||| || ||| || |
Sbjct 2667970 GGTGACACCCACCTGGGTGGCCAGGATTTCGA--CACGAACCTCCTCGACCACTGCAAGA 2668027
Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073
| || |||| || |||| ||||| || | || || || | | || || ||| |||
Sbjct 2668028 AGGACTTCCAGCGCAAGACCAAGAAGGACCTGTCGGGCGATGCCCGTGCGCTCCGTAGGC 2668087
Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGT 196131
| ||||| || || || |||||||| | ||||| || | |||| | || || | |
Sbjct 2668088 TCAGGACCGCTTGCGAGCGTGCCAAGAGGACTCTGTC--CAACGGTGCCCAGACCACCAT 2668145
Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA--TACAACTATTACCCGTGCACGT 196189
|||||| || ||| | || ||||| |||||| | | || ||||||||||| |
Sbjct 2668146 TGAGATCGACTCGCTCTTCGACGGCGAGGACTTCAACCTGCAG--ATTACCCGTGCTAGG 2668203
Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249
||||| ||| | ||| | | ||||| | | | || ||||| | || || |||
Sbjct 2668204 TTTGAGGAGCTGAACGCCGCCGCGTTTAAGGGCACTCTCGAGCCTGTCGCCCAGGTTCTT 2668263
Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309
||||| || || ||||| ||||| || || ||||| || || || || |||
Sbjct 2668264 AAGGACGCCGCTATCGAGAAGTCGGCTGTTGACGAGATCGTCCTGGTCGGCGGCTCGACC 2668323
Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369
||||| || || || || |||| || |||||| | || | | | ||
Sbjct 2668324 CGTATCCCCCGTATCCAGAAGCTGCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGAAG 2668383
Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429
| |||||||| ||||| || || || ||||||||||| |||||||| | | |||| ||
Sbjct 2668384 AGCATCAACCCCGATGAGGCTGTGGCCTATGGTGCGGCTGTTCAGGCCGGTGTTCTTTCG 2668443
Query 196430 GGTGTTGACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486
|| | || | | || | ||||| ||||| || || || || ||| | |||
Sbjct 2668444 GGCAAGGCCACGTCTGCTGACACCAGCGATCTGCTGCTGCTCGACGTCGCCCCCCTGTCC 2668503
Query 196487 CTGGGT 196492
||||||
Sbjct 2668504 CTGGGT 2668509
>seq23
Length=7462253
Score = 167 bits (184), Expect = 3e-36
Identities = 175/229 (76%), Gaps = 1/229 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||||||||| ||||| || || || ||||||||||| ||||| ||||||
Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| ||||||| || || ||||| |||| ||| || || |||
Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCA-TCCCCCTGACCAG 7209890
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || ||||| || |||||||| || ||||| || || || | || ||||||
Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
| || |||||| || |||||||| || || | || || |||||||
Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGTG 7209999
>seq67
Length=2709248
Score = 161 bits (178), Expect = 1e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| ||||| ||||| ||| | ||||||||||| ||||| ||||| || || || ||
Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || |||||| | || |||||| || |||||||| ||||| || || || |||
Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || || || || || || ||||| || ||||| |||||| | | || ||||||
Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
|||| |||||||| ||||| ||||| || ||
Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCT 458464
Score = 143 bits (158), Expect = 4e-29
Identities = 169/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| || || || || || || || || ||||| || || || ||||| |
Sbjct 458905 GTATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCAT 458846
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
||||||| ||||| ||| | || | ||||||||||| ||||| || || || || ||||
Sbjct 458845 CAGACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATC 458786
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
||||||| | || ||||| || || ||||| || || || || || || | |||||||
Sbjct 458785 AGCAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACA 458726
Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|| | || |||||| || || ||| | || || | || || |||||
Sbjct 458725 ACATCCAGAAGGAGAGCACCCTCCACTTGGTGCTTCGTCTGCGCGGTGG 458677
Score = 138 bits (152), Expect = 1e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
|| || || || |||||||||||||| ||||| || || || ||||| ||| |||| ||
Sbjct 459335 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGATACCATCGACAACGTCAAGTCC 459276
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
||||| || || ||||| || || || ||||| ||||| || || || || ||||| ||
Sbjct 459275 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAG 459216
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
|| || || || || || |||||| | || |||||| | ||||| ||||| || || |||
Sbjct 459215 CAACTCGAGGACGGCCGGACCCTCTCGGACTACAACATCCAAAAAGAGTCGACGCTGCAC 459156
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || | || || || |||
Sbjct 459155 CTCGTCCTCCGCCTCCGTGGAGGT 459132
Score = 105 bits (116), Expect = 9e-18
Identities = 250/377 (66%), Gaps = 3/377 (1%)
Strand=Plus/Minus
Query 195611 GGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAG 195670
|| ||| |||| ||| | |||| || || |||| | ||| | || |||||||||
Sbjct 393415 GGCGAGGAGAAGCAACTGTCTCCTGAGGAGGTTTCCGCCATGATCCTGGGCAAGATGAAG 393356
Query 195671 GAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730
|| || || || | | | || || | || | | | || || || || || || ||
Sbjct 393355 GATGTCGCCGAGTCCTACCTCGGCAAGAAGGTCACACACGCCGTCGTCACCGTTCCGGCC 393296
Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790
||||||| || || | ||||| || |||||||| | || || ||||| |||
Sbjct 393295 TACTTCAACGACAACCAGAGGCAGGCTACCAAGGACGCCGGCATCATCGCCGGTCTGAAC 393236
Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850
||| | || |||| || || || ||||| || || || || || ||||||||||
Sbjct 393235 GTTCTCCGTATCGTCAACGAGCCCACTGCGGCCGCTATCGCGTACGGCCTGGACAAGACT 393176
Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910
||| ||| | | | || || | ||||| || |||||||| || ||||| ||
Sbjct 393175 GAGGGCGAGAAGCAGATCGTCGTG---TACGATCTGGGCGGTGGTACTTTCGATGTTTCG 393119
Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970
|| || || || || | ||||| || ||||||||| |||||||| |||||
Sbjct 393118 CTCCTGTCGATCGACAACGGCGTTTTCGAGGTCCTGGCTACTGCCGGTGATACCCATCTT 393059
Query 195971 GGTGGTGAAGATTTCGA 195987
||||| || ||||||||
Sbjct 393058 GGTGGCGAGGATTTCGA 393042
Score = 100 bits (110), Expect = 4e-16
Identities = 327/506 (65%), Gaps = 8/506 (2%)
Strand=Plus/Minus
Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432
|| ||||| ||||| || ||||| | || ||||| || ||||||| | |||| || ||
Sbjct 392656 ATTAACCCCGATGAGGCTGTTGCGTTCGGCGCGGCTGTCCAGGCTGGTGTTCTGTCTGGC 392597
Query 196433 GTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCG-TATCCCTGGG 196491
| || || | | | | | ||| || || | | ||||| | |||| ||
Sbjct 392596 GAGGAGGGTACTGATGACATTGTTCTCATGG-ACGTCA------ACCCGCTCACCCTTGG 392544
Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551
| |||| || | || ||||| ||||| || |||| | ||||| |||| || ||
Sbjct 392543 TATTGAGACCACCGGCGGTGTCATGACCAAGCTTATCCCCCGTAACACTCCTATCCCTAC 392484
Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611
||| || |||| || || |||| || || || | || | || || ||
Sbjct 392483 CCGCAAGAGCCAGATCTTCTCGACTGCGGCCGACAACCAGCCCGTCGTCCTGATCCAGGT 392424
Query 196612 ATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGAC 196671
| ||| |||||||||||| | ||||| ||| | || || || | ||||| | ||
Sbjct 392423 CTTTGAGGGAGAACGCTCCATGACCAAGGACAACAACCTCCTGGGCAAGTTCGAGCTTAC 392364
Query 196672 GGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGC 196731
|| || || |||| ||| | || || ||||| | |||| |||||| | || ||
Sbjct 392363 CGGTATCCCGCCTGCGCCCCGCGGCCAGCCGCAGATCGAGGTTTCCTTCGAGCTTGATGC 392304
Query 196732 AAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGT 196791
|| || || || || || | || | ||||||| ||||||| |||| ||||
Sbjct 392303 CAACGGTATCCTGAAGGTGTCGGCCCACGACAAGGGCACTGGCAACACTGAGCAGATCAC 392244
Query 196792 GATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGC 196851
|| | ||| |||||||| || || | ||||||| || || |||||||| || ||
Sbjct 392243 CATCAACAACGACAAGGGCCGTCTGACCCAGGAGGAGATCGACCGTATGGTCAGCGAGGC 392184
Query 196852 GGAAAAGTACAGGGAAGAAGACGAGG 196877
|| |||||| || || ||| |||
Sbjct 392183 TGAGAAGTACGCCGAGGAGGACAAGG 392158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861742137600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |