Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1 324 1e-83 seq67 132 4e-26 seq23 105 6e-18 >seq1 Length=15654088 Score = 324 bits (358), Expect = 1e-83 Identities = 1049/1605 (65%), Gaps = 69/1605 (4%) Strand=Plus/Plus Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAA-CTTGATCAAGTCGTTTAT 138491 || |||||||| || |||||| ||| ||| | ||| || || || ||| || | Sbjct 14219947 GCGATGATGCGGTTCTTCATGTTGTCGGACCACA-AGCCAAGCTCGACCAGGTCCTTCAG 14220005 Query 138492 CAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTT 138551 || || ||| | |||||| || || ||||| | || ||||| ||| |||||| Sbjct 14220006 GAGCCATGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGA 14220065 Query 138552 GGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611 ||| | ||||| || | |||||||| ||||||||||| | |||| | ||||| ||||| Sbjct 14220066 CGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCAT 14220125 Query 138612 GTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGA 138671 | |||||| | || || || || | |||||| ||||||| ||||||||||| Sbjct 14220126 GGGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTC 14220185 Query 138672 CCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----A 138727 ||||||||| | || || || ||||||||| |||||||| | || ||| | Sbjct 14220186 CCAGTCCCAGAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGA 14220245 Query 138728 AACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGC 138787 || ||| | || ||||| | ||| || ||| |||||| |||| | Sbjct 14220246 CACAGGCGAG----CCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCG---C 14220298 Query 138788 TCGCCTCG---AGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGG 138844 || || || || | | ||| || || || ||||||| |||||| || | Sbjct 14220299 ACGAGGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAG 14220358 Query 138845 CCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGC 138904 |||||| |||| | |||| ||| ||| ||| || |||||||| || ||||||| Sbjct 14220359 CCTCGGGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGC 14220418 Query 138905 CCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAA 138960 | | |||| || || |||||||| || ||| || || || || || || || Sbjct 14220419 CTAGGCCGATGGGCCGGTGGCGCAGGTT----GCTGTTACGAGCCTCCTGGACCGGGTAG 14220474 Query 138961 TAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAAT 139020 ||||| || |||||||| ||||| | ||| || ||||| |||| ||| | | | | Sbjct 14220475 TAGTTGACGTCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCT-CGTGCAG 14220533 Query 139021 CGTTCAAAA-TCGTATGTGCCCCCGTTGTCGTCGACGACGT-CGACAAATTTGTTGACAC 139078 | | | || || || | |||| |||||| |||||| | | || || | | Sbjct 14220534 CTTCCGGAAGTCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAG---------CGC 14220584 Query 139079 AAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGG 139138 || ||| || | ||||||||| ||||| || ||||| || ||| ||||| || |||| Sbjct 14220585 CAA-CGACGCCAGGTTGCACACAGCCACCTCATCGGGCGCGA-GTACTCGACGATCTCGG 14220642 Query 139139 CACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAG 139198 |||| ||| | ||| || || | || | || ||||| || ||||| || Sbjct 14220643 TGCACAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 14220702 Query 139199 CATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGA 139258 |||||||| ||||| | || ||||||| || || | ||| | ||| | Sbjct 14220703 GGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC 14220762 Query 139259 ACAAGTC-----CCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313 ||| | ||| | || || | || | | | || |||||||||||||| Sbjct 14220763 ACAGCTTTTGCGCCTTGAGCGTCTT-GCGGCCCTTGC----CCTCACGCTCGTACTTTTC 14220817 Query 139314 GTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGAC 139372 ||| | | ||||| |||| | |||||| ||| | || | | |||| || || | Sbjct 14220818 GTACAAAGCCTCGAACTCGT-CGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGC 14220876 Query 139373 ACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA 139432 ||||||||| ||| |||||||| || || ||| ||||||| || || || ||||| | Sbjct 14220877 ACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATA 14220936 Query 139433 AAGCGAACAGCAAA---TCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGT 139489 || ||| ||| ||||| || | || ||| || ||| || || Sbjct 14220937 GGGC---CAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 14220993 Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCC 139549 ||||| || || ||||| |||||||| || |||||||||||||| | ||||| | Sbjct 14220994 CGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGC 14221053 Query 139550 GTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606 | ||| ||||| || ||||||| || | | || ||||| || || | ||| ||| Sbjct 14221054 GCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCA 14221113 Query 139607 CCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCTCGGACG 139662 | | ||| | | ||| |||||||||| |||| ||| | || ||| |||| | Sbjct 14221114 CGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCG----CGGATG 14221169 Query 139663 TCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAAT 139722 || | ||||| |||||| |||||| | | ||||| || | | || | Sbjct 14221170 CGGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGG 14221229 Query 139723 GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGT 139782 || ||||| ||||| ||||||||||||| ||| |||||| ||||| ||||| || Sbjct 14221230 GTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGC 14221289 Query 139783 TGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTT 139841 || | | ||||||||| || ||||| ||| ||||| ||||| | ||| | Sbjct 14221290 TGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTACTTG-CT 14221348 Query 139842 CGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGA 139901 |||||| | | |||||| |||| ||| | | || | || ||| ||||||| Sbjct 14221349 CGACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGC 14221408 Query 139902 GACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA 139961 ||| ||||| | ||| || ||| || ||| | | | ||| |||| || ||| || Sbjct 14221409 GACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGAGCAGGTA 14221468 Query 139962 ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | ||| ||||||||| ||||||||||| ||||||||| || Sbjct 14221469 CGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAGTC 14221513 >seq67 Length=2709248 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || ||||| ||||| || | | Sbjct 458903 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCA 458844 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || || || ||||| Sbjct 458843 GACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAG 458784 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || ||||||||||| | | |||| ||||| ||| Sbjct 458783 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACAAC 458724 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||||||||| | || ||||||| ||| Sbjct 458723 ATCCAGAAGGAGAGCACCCTCCACTTGGTGCTTCGTCTGCGCGGTGGC 458676 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || ||||| || ||||||||||| ||| | || Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| |||||||| || || || || || ||||| || || Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || |||||||||||| | | | |||| || || ||| Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||| ||||| || ||| | ||| |||| |||| || || Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCTGCGTCTGCGTGGCGG 458449 >seq23 Length=7462253 Score = 105 bits (116), Expect = 6e-18 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCC-CCTGACCAG 7209890 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || ||||||||||||||| | | |||| || || ||| Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || |||||| | ||| |||| |||| || || || Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGTGG 7210000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897150102400