Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1 324 1e-83
seq67 132 4e-26
seq23 105 6e-18
>seq1
Length=15654088
Score = 324 bits (358), Expect = 1e-83
Identities = 1049/1605 (65%), Gaps = 69/1605 (4%)
Strand=Plus/Plus
Query 138433 GCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAA-CTTGATCAAGTCGTTTAT 138491
|| |||||||| || |||||| ||| ||| | ||| || || || ||| || |
Sbjct 14219947 GCGATGATGCGGTTCTTCATGTTGTCGGACCACA-AGCCAAGCTCGACCAGGTCCTTCAG 14220005
Query 138492 CAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTT 138551
|| || ||| | |||||| || || ||||| | || ||||| ||| ||||||
Sbjct 14220006 GAGCCATGGGTTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGA 14220065
Query 138552 GGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCAT 138611
||| | ||||| || | |||||||| ||||||||||| | |||| | ||||| |||||
Sbjct 14220066 CGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCAT 14220125
Query 138612 GTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGA 138671
| |||||| | || || || || | |||||| ||||||| |||||||||||
Sbjct 14220126 GGGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTC 14220185
Query 138672 CCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----A 138727
||||||||| | || || || ||||||||| |||||||| | || ||| |
Sbjct 14220186 CCAGTCCCAGAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGA 14220245
Query 138728 AACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGC 138787
|| ||| | || ||||| | ||| || ||| |||||| |||| |
Sbjct 14220246 CACAGGCGAG----CCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCG---C 14220298
Query 138788 TCGCCTCG---AGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGG 138844
|| || || || | | ||| || || || ||||||| |||||| || |
Sbjct 14220299 ACGAGGCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAG 14220358
Query 138845 CCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGC 138904
|||||| |||| | |||| ||| ||| ||| || |||||||| || |||||||
Sbjct 14220359 CCTCGGGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGC 14220418
Query 138905 CCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAA 138960
| | |||| || || |||||||| || ||| || || || || || || ||
Sbjct 14220419 CTAGGCCGATGGGCCGGTGGCGCAGGTT----GCTGTTACGAGCCTCCTGGACCGGGTAG 14220474
Query 138961 TAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAAT 139020
||||| || |||||||| ||||| | ||| || ||||| |||| ||| | | | |
Sbjct 14220475 TAGTTGACGTCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCT-CGTGCAG 14220533
Query 139021 CGTTCAAAA-TCGTATGTGCCCCCGTTGTCGTCGACGACGT-CGACAAATTTGTTGACAC 139078
| | | || || || | |||| |||||| |||||| | | || || | |
Sbjct 14220534 CTTCCGGAAGTCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAG---------CGC 14220584
Query 139079 AAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGG 139138
|| ||| || | ||||||||| ||||| || ||||| || ||| ||||| || ||||
Sbjct 14220585 CAA-CGACGCCAGGTTGCACACAGCCACCTCATCGGGCGCGA-GTACTCGACGATCTCGG 14220642
Query 139139 CACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAG 139198
|||| ||| | ||| || || | || | || ||||| || ||||| ||
Sbjct 14220643 TGCACAGGTTAGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGT 14220702
Query 139199 CATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGA 139258
|||||||| ||||| | || ||||||| || || | ||| | ||| |
Sbjct 14220703 GGTCTTTGTACAGCATGAAGGGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC 14220762
Query 139259 ACAAGTC-----CCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTC 139313
||| | ||| | || || | || | | | || ||||||||||||||
Sbjct 14220763 ACAGCTTTTGCGCCTTGAGCGTCTT-GCGGCCCTTGC----CCTCACGCTCGTACTTTTC 14220817
Query 139314 GTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGAC 139372
||| | | ||||| |||| | |||||| ||| | || | | |||| || || |
Sbjct 14220818 GTACAAAGCCTCGAACTCGT-CGCCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGC 14220876
Query 139373 ACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACA 139432
||||||||| ||| |||||||| || || ||| ||||||| || || || ||||| |
Sbjct 14220877 ACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATA 14220936
Query 139433 AAGCGAACAGCAAA---TCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGT 139489
|| ||| ||| ||||| || | || ||| || ||| || ||
Sbjct 14220937 GGGC---CAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGT 14220993
Query 139490 TAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCC 139549
||||| || || ||||| |||||||| || |||||||||||||| | ||||| |
Sbjct 14220994 CGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGC 14221053
Query 139550 GTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCT 139606
| ||| ||||| || ||||||| || | | || ||||| || || | ||| |||
Sbjct 14221054 GCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCA 14221113
Query 139607 CCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCTCGGACG 139662
| | ||| | | ||| |||||||||| |||| ||| | || ||| |||| |
Sbjct 14221114 CGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCCCGTGGCG----CGGATG 14221169
Query 139663 TCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAAT 139722
|| | ||||| |||||| |||||| | | ||||| || | | || |
Sbjct 14221170 CGGTGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCATGGCACAGGTTTTGAGG 14221229
Query 139723 GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGT 139782
|| ||||| ||||| ||||||||||||| ||| |||||| ||||| ||||| ||
Sbjct 14221230 GTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGTCGACCAGGAAGCACGACGACAGC 14221289
Query 139783 TGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTT 139841
|| | | ||||||||| || ||||| ||| ||||| ||||| | ||| |
Sbjct 14221290 TGGGCCTGGGGCGTGCCGGCGTTGAAGAGAGTGGGAGAGGCGTGGGTGAAGTACTTG-CT 14221348
Query 139842 CGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGA 139901
|||||| | | |||||| |||| ||| | | || | || ||| |||||||
Sbjct 14221349 CGACATGAGGTTGTACGTCTCGAGCACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGC 14221408
Query 139902 GACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA 139961
||| ||||| | ||| || ||| || ||| | | | ||| |||| || ||| ||
Sbjct 14221409 GACGCGCATGATCATGTGCTGGGGGCGCTCGACGATCTTGCCGTCGAGCTTGAGCAGGTA 14221468
Query 139962 ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
| ||| ||||||||| ||||||||||| ||||||||| ||
Sbjct 14221469 CGAGCGCTCCAGGGTCTTGAAGCCAAAGTACTGATAGTTGAAGTC 14221513
>seq67
Length=2709248
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || || ||||| ||||| || | |
Sbjct 458903 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCA 458844
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| |||||||| || || || || || |||||
Sbjct 458843 GACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAG 458784
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||||||||||||||| || || ||||||||||| | | |||| ||||| |||
Sbjct 458783 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACAAC 458724
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || ||||||||| | || ||||||| |||
Sbjct 458723 ATCCAGAAGGAGAGCACCCTCCACTTGGTGCTTCGTCTGCGCGGTGGC 458676
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || ||||| || ||||||||||| ||| | ||
Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | ||||| |||||||| || || || || || ||||| || ||
Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||| || || || |||||||||||| | | | |||| || || |||
Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||||| ||||| || ||| | ||| |||| |||| || ||
Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCTGCGTCTGCGTGGCGG 458449
>seq23
Length=7462253
Score = 105 bits (116), Expect = 6e-18
Identities = 162/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || ||||| || || || || || | | |
Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCC-CCTGACCAG 7209890
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || ||||||||||||||| | | |||| || || |||
Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| || ||||| || |||||| | ||| |||| |||| || || ||
Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGGTGG 7210000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897150102400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |