Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq12 123 2e-23 >seq12 Length=9596913 Score = 123 bits (136), Expect = 2e-23 Identities = 221/321 (69%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 34313 TGAGCTCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| ||| ||||| ||||| | ||| || | | | |||| |||||| ||||||||| Sbjct 3598122 TGACCTCGGTCTCGGGGTTCTTGCACTTTTTGCAGAGAACA--AACTTGTTGATGAAACC 3598179 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || ||||||| | ||| ||| ||||||| |||||||| ||| | || || | Sbjct 3598180 GTCGAGGTGGTCCTGGAGCTTTGCGGCATCGTGGGCGCCGTTGATGATCCAGCGGTCATC 3598239 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 |||| | || || || || |||||| | || |||||||| | |||| | Sbjct 3598240 GGCAGGGTCGAGGTTGGTCTGGGCACCGAGCTCGAAGCCAAAGTACTTGATGAGGTAGCT 3598299 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | ||||| | ||| || || | | | || |||||||| || ||||||||||| Sbjct 3598300 TCCAGGACGGGCGAGCTGCTGAGCAACGTTGCTCAGGTTGACGACAACGGTCTTGATGCC 3598359 Query 34551 GTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTC 34610 ||||||||| || |||| ||||| || ||| ||| |||||||| ||||| |||| Sbjct 3598360 GTTGCCCTTGCCCTCGATCTTGGTCTGGAGACGCTCCATCTTGTAGCGATAGAAGACGTC 3598419 Query 34611 CGCCACATTGCGGTTAACGTT 34631 | |||| |||| ||||| Sbjct 3598420 GGTGACATCGCGGCGGACGTT 3598440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841197479440