Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq23 143 2e-29 seq67 122 6e-23 >seq23 Length=7462253 Score = 143 bits (158), Expect = 2e-29 Identities = 162/216 (75%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | |||||||||||||| ||||| ||||| || || |||| |||| Sbjct 7209983 CAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 7209924 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || |||||||| || |||||||| | || | ||||||||||| Sbjct 7209923 CTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTC-AGGGGGATGCCCTCCTTGTC 7209865 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || ||||| | |||| || | | ||| || |||| ||| || || Sbjct 7209864 CTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 7209805 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 ||| |||||||||||||| ||||||||||||||||| Sbjct 7209804 CTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGAT 7209769 >seq67 Length=2709248 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||||||||||||||| ||||| || ||||| || |||| | || Sbjct 458692 AGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCC 458751 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || ||||||| |||||||| || | || | ||||||||||| Sbjct 458752 TCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCT 458811 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | |||||| || | || |||||| Sbjct 458812 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTC 458871 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| || ||||||||||| Sbjct 458872 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903 Score = 122 bits (134), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||||||||||||||| ||||| ||||| || || | || | || Sbjct 458920 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCC 458979 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| || |||||||| | || | ||||||||||| Sbjct 458980 TCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 459039 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || | ||| || || | ||| || Sbjct 459040 TGAATCTTCGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGAT 459095 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| ||||| ||||| || || || |||||||| Sbjct 459096 GGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || ||||| | || ||||||||||||||| |||||||| | | | || |||| Sbjct 458463 CAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATC 458522 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || |||||||| | || | |||||||| || Sbjct 458523 CTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATC 458582 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || | ||||| || | || ||||| Sbjct 458583 CTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGT 458642 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || | |||||| || |||||||||||| Sbjct 458643 TTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||| || || ||||| |||||||| ||| | || | || Sbjct 459148 AGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 459207 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || |||||||| || || |||||||| | || | ||||||||||| Sbjct 459208 TCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 459267 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || || | ||| |||||| Sbjct 459268 TGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTC 459327 Query 34946 TTTCCCGT 34953 || ||||| Sbjct 459328 TTGCCCGT 459335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692482449520