Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq23 143 2e-29
seq67 122 6e-23
>seq23
Length=7462253
Score = 143 bits (158), Expect = 2e-29
Identities = 162/216 (75%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | |||||||||||||| ||||| ||||| || || |||| ||||
Sbjct 7209983 CAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATC 7209924
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || || || |||||||| || |||||||| | || | |||||||||||
Sbjct 7209923 CTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTC-AGGGGGATGCCCTCCTTGTC 7209865
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||||| | |||| || | | ||| || |||| ||| || ||
Sbjct 7209864 CTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACCTCAAGGGTGATAGT 7209805
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||| |||||||||||||| |||||||||||||||||
Sbjct 7209804 CTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGAT 7209769
>seq67
Length=2709248
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | ||||||||||||||| ||||| || ||||| || |||| | ||
Sbjct 458692 AGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCC 458751
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| || || ||||||| |||||||| || | || | |||||||||||
Sbjct 458752 TCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCT 458811
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | |||| || | |||||| || | || ||||||
Sbjct 458812 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTC 458871
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 458872 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||||||||||||||| ||||| ||||| || || | || | ||
Sbjct 458920 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCC 458979
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||||||||| || |||||||| | || | |||||||||||
Sbjct 458980 TCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 459039
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | ||| || || | ||| ||
Sbjct 459040 TGAATCTTCGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGAT 459095
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| ||||| ||||| || || || ||||||||
Sbjct 459096 GGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Score = 111 bits (122), Expect = 1e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | || ||||||||||||||| |||||||| | | | || ||||
Sbjct 458463 CAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATC 458522
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| || ||||||||||| || |||||||| | || | |||||||| ||
Sbjct 458523 CTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATC 458582
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || ||| | |||| || | ||||| || | || |||||
Sbjct 458583 CTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGT 458642
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || | |||||| || ||||||||||||
Sbjct 458643 TTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 458676
Score = 82.4 bits (90), Expect = 5e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||| || || ||||| |||||||| ||| | || | ||
Sbjct 459148 AGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCGGCCGTCC 459207
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| |||||||| || |||||||| || || |||||||| | || | |||||||||||
Sbjct 459208 TCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 459267
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || || | ||| ||||||
Sbjct 459268 TGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTC 459327
Query 34946 TTTCCCGT 34953
|| |||||
Sbjct 459328 TTGCCCGT 459335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692482449520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |