Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq67 87.8 1e-12 seq23 82.4 6e-11 >seq67 Length=2709248 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || || || || |||||||| || ||||| || | | Sbjct 458675 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAAACCATCACGCTCGAAGTCGAATCATCC 458616 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | ||||| ||||| ||||| || ||| | || ||| ||| Sbjct 458615 GATACGATTGATAACGTAAAGAGCAAGATCCAGGATAAGGAGGGCATCCCTCCGGACCAG 458556 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||||| || ||||||||||| | | || || ||||||||||| Sbjct 458555 CAGCGCCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGCCGTACCTTGTCGGACTACAAC 458496 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 ||||| |||||||| || | ||| | ||| || | |||| || ||| Sbjct 458495 ATTCAGAAGGAGTCGACTCTCCACCTAGTGCTGCGTCTGCGTGGCGGA 458448 >seq23 Length=7462253 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| || || | || ||||| || || ||| | || |||| | || Sbjct 7209772 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 7209831 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| || || || ||| | ||| || | ||| Sbjct 7209832 GACACGATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCTG-ACCAG 7209890 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | |||||| |||||||||||||| | | || || | ||||||||| Sbjct 7209891 CAGCGCCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCGCACGCTGTCCGACTACAAC 7209950 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||| ||| | ||| | ||| || | |||| || || Sbjct 7209951 ATCCAGAAGGAGAGCACGCTACACCTAGTGCTGCGTCTGCGTGGTGG 7209997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876411095120