Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq67 131 1e-25
seq23 116 2e-21
>seq67
Length=2709248
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | |||||| || || |||||||| || || ||||||||||| ||
Sbjct 458677 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAC 458736
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| |||| || || || ||||| |||||||| |||||||| | ||
Sbjct 458737 AGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGG 458796
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||| || ||||| ||| ||| ||| || | ||| | ||||| ||| || ||
Sbjct 458797 ATACCCTCCTTGTCTTGAATCTTCGACTTC-ACGTTGTCGATCGTGTCTGATGACTCGAC 458855
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||| || || || || | ||| || || ||||||||||||
Sbjct 458856 TTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 458904
>seq23
Length=7462253
Score = 116 bits (128), Expect = 2e-21
Identities = 166/230 (72%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | || ||| | ||| | ||||| |||||||| || || |||||||| ||||
Sbjct 7209999 CACCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGG 7209940
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || |||| ||||| || ||||| |||| |||||||| || | |
Sbjct 7209939 ACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGGG 7209880
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || || ||||| || || || | ||| ||| | |||||||| || |||
Sbjct 7209879 G-ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATCGTGTCGCTCGACTCC 7209822
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| ||||| || || || || | || || ||||||||||||||
Sbjct 7209821 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 7209772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703679513600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |