Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq67 131 1e-25 seq23 116 2e-21 >seq67 Length=2709248 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | |||||| || || |||||||| || || ||||||||||| || Sbjct 458677 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAC 458736 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| |||||||| |||||||| | || Sbjct 458737 AGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGG 458796 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| ||| ||| || | ||| | ||||| ||| || || Sbjct 458797 ATACCCTCCTTGTCTTGAATCTTCGACTTC-ACGTTGTCGATCGTGTCTGATGACTCGAC 458855 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||| || || || || | ||| || || |||||||||||| Sbjct 458856 TTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 458904 >seq23 Length=7462253 Score = 116 bits (128), Expect = 2e-21 Identities = 166/230 (72%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | ||||| |||||||| || || |||||||| |||| Sbjct 7209999 CACCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGG 7209940 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || |||| ||||| || ||||| |||| |||||||| || | | Sbjct 7209939 ACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGGG 7209880 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || || | ||| ||| | |||||||| || ||| Sbjct 7209879 G-ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATCGTGTCGCTCGACTCC 7209822 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || |||||||||||||| Sbjct 7209821 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 7209772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703679513600