Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq67 93.3 1e-13 >seq67 Length=2709248 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || || ||||| ||||| ||||| ||| ||| Sbjct 459128 CAGATTTTCGTCAAAACCCTGACGGGCAAGACCATCACCTTGGAGGTGGAGTCTTCGGAC 459069 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || || || ||| || Sbjct 459068 ACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 459009 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | || || || ||||| | |||| |||||| || Sbjct 459008 CGCCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGGACTCTTTCCGACTACAACATC 458949 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||| || || ||||| || Sbjct 458948 CAGAAGGAGAGCACCCTCCACCTCGT 458923 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| || || || ||||| ||||||| || || ||| Sbjct 458900 CAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCAGAC 458841 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || || || ||||| ||| Sbjct 458840 ACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAGCAA 458781 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| || || |||||| |||| || || | ||| || | ||||||||| || Sbjct 458780 CGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACAACATC 458721 Query 206353 CAGAAAGAG 206361 ||||| ||| Sbjct 458720 CAGAAGGAG 458712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819588633680