Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq45 84.2 6e-12 >seq45 Length=5506958 Score = 84.2 bits (92), Expect = 6e-12 Identities = 133/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 11634 ATCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTGCCGGATGTCCTG 11693 ||||||||||| |||||| ||||||| || ||| |||| || ||| |||| || | || Sbjct 443581 ATCTACTTCCCGCACAACGTCGACTTTCGGGGCAGAGCGTATCCGCTGCC-GACCTACTT 443639 Query 11694 AACCCGCAGGGCAG-CGACCCCGTTAAGGCGCTTCTCAGG---TTCGCCGAGGGGAAGCC 11749 | || || || || ||||| |||| ||| |||| | |||||| |||| ||| Sbjct 443640 CAACCACATGGGAGCCGACCACGTT--CGCG-GCCTCATGCTTTTCGCCAAGGGCAAGGA 443696 Query 11750 TCTCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCATCGA 11809 || || | ||| ||| || ||||||| | ||||| ||| ||| || |||| |||| Sbjct 443697 GCTTGGAGAGGAAGGCTTCCGGTGGCTCAAGGTCCACCTCGCCAACGTGTACGGCTTCGA 443756 Query 11810 CAAGG 11814 ||||| Sbjct 443757 CAAGG 443761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146175861132800