Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 208 7e-49 seq67 91.5 1e-13 >seq1 Length=15654088 Score = 208 bits (230), Expect = 7e-49 Identities = 985/1541 (64%), Gaps = 48/1541 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || ||||| || | | || | ||| ||| | ||| Sbjct 14220016 TTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGC 14220075 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | |||| | ||||| |||||| |||||| Sbjct 14220076 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACA 14220135 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || |||| ||||| | ||||| |||| | | | ||||||||| Sbjct 14220136 AGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCCCAGTCCCAG 14220195 Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCA--CTCCTCGACTGGCGGGAC 147130 | | ||| ||| | |||||||||||||||||||| || | | | |||| | || Sbjct 14220196 AGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGAC--ACAGGCG 14220253 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGT-CGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||| || | || | |||| | || | | ||| |||||| || || || || Sbjct 14220254 AGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGC-GCGCCAGCTCGCACGAGGCGGTCAGG 14220312 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 || | | ||| ||||| || ||| || ||||| || || || || |||| Sbjct 14220313 GCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGAGACTCG 14220372 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | |||| ||||| | ||||||||||||| |||||| | || | |||||| || Sbjct 14220373 AAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGATGGGC 14220432 Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAA 147367 || || |||||| | | || || || | || |||| |||| || || | Sbjct 14220433 CGGTGGCGCAGGTTGCT--GTTACGAGCCTCCTGGACCGGGTAGTAGTTGACGTCGATGA 14220490 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427 ||||||| || ||||| || || || | || | | || ||| ||| ||||| | Sbjct 14220491 TCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGTCATAGG 14220550 Query 147428 TCCCGTC-TTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCC 147486 || || || | || || | || || || | |||||||| ||||| || ||| Sbjct 14220551 CGCCCTCGTTGTAGTCG-ACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGCC 14220609 Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT---GCTGCATTTTATG 147543 ||| |||| || ||||| ||||| |||| ||||||||| ||||| ||| Sbjct 14220610 ACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC---GGATG 14220665 Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 147603 |||| || | ||| ||||| || || ||||| ||||||| | |||||| | || Sbjct 14220666 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGG 14220725 Query 147604 CCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACC 147660 ||| |||||| || | || | ||| | ||| ||| | ||||| | | Sbjct 14220726 TTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC---ACAGCTTTTGCGCCTTGAGC 14220782 Query 147661 CGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCG 147720 || || |||||| |||||| |||||||| ||| |||||||||||| Sbjct 14220783 GTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCG 14220842 Query 147721 TAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780 ||||| || || ||||| || |||| | || ||||| |||| ||| | ||| | Sbjct 14220843 TAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTC 14220902 Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840 | ||| || ||| || || || || | ||| || || | ||| ||||| || | Sbjct 14220903 TCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGG 14220962 Query 147841 CAATCCTC---GGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTG 147896 ||||| | || | ||||| || | | | || | | | | ||||||||| Sbjct 14220963 ATCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACACGTCGGCGTG 14221018 Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATG 147953 ||| || || | |||| ||| | || || ||| || || ||||||||||| | Sbjct 14221019 CCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTA 14221078 Query 147954 GCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013 || || ||||||| || || || | |||||| | | |||| | | ||||||||||| Sbjct 14221079 ACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGT 14221138 Query 148014 GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCC 148073 | ||| | | ||| ||| || | ||| | || | ||| || |||||| | Sbjct 14221139 GCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCCGGC 14221198 Query 148074 GTACTTTGA---TATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTC 148130 ||| || |||||| | | | | || |||||| || ||||||||||| Sbjct 14221199 CATCTTGGAGATCATGGCACAGGTTTTG---AGGGTGTCGTAGATACCATCGATGCTGTC 14221255 Query 148131 GTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAA 148190 || || | | | | || || ||||| ||| || | |||| || || ||| Sbjct 14221256 GTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAA 14221315 Query 148191 AAGGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATA 148248 || |||||| ||||| || || | || | || ||| | | |||||||| | Sbjct 14221316 GAGAGTGGGAGAGGCGTGGGTGAAGTACTTGCTCGA--CATGAGGTTGTACGTCTCGAGC 14221373 Query 148249 GCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGT 148308 || ||||||| |||||| ||||| | ||||||||||||| ||||||||| || Sbjct 14221374 ACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGGGGG 14221433 Query 148309 CGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367 || ||| | | |||| || || |||||| || || || ||||| ||| | || Sbjct 14221434 CGCTCGACGATCTTG-CCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCC 14221492 Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 |||||||| || | || || | || || ||||||||| Sbjct 14221493 AAAGTACTGATAGTTGAAGTCCCGGTCATAGACGATGGCCG 14221533 >seq67 Length=2709248 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || |||||||||||||| || |||||| ||| || ||||| || || | Sbjct 458482 GACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCG 458541 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || ||||| ||||| || ||||| || || || | Sbjct 458542 AAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTGCTCTTTACG 458601 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | || ||||||| ||| | ||||| ||||||| || || Sbjct 458602 TTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTC 458661 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 458662 ACGAAGATCTGCATG 458676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610723388800