Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 208 7e-49
seq67 91.5 1e-13
>seq1
Length=15654088
Score = 208 bits (230), Expect = 7e-49
Identities = 985/1541 (64%), Gaps = 48/1541 (3%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || |||||||| || ||||| || | | || | ||| ||| | |||
Sbjct 14220016 TTGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGACGTGTAGGGC 14220075
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || |||| || ||||| | || || | |||| | ||||| |||||| ||||||
Sbjct 14220076 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATGGGCGCCACA 14220135
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| || || || |||| ||||| | ||||| |||| | | | |||||||||
Sbjct 14220136 AGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCCCAGTCCCAG 14220195
Query 147073 ATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCA--CTCCTCGACTGGCGGGAC 147130
| | ||| ||| | |||||||||||||||||||| || | | | |||| | ||
Sbjct 14220196 AGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGCGAC--ACAGGCG 14220253
Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGT-CGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189
||| || | || | |||| | || | | ||| |||||| || || || ||
Sbjct 14220254 AGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGC-GCGCCAGCTCGCACGAGGCGGTCAGG 14220312
Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249
|| | | ||| ||||| || ||| || ||||| || || || || ||||
Sbjct 14220313 GCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCGGGAGACTCG 14220372
Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309
| |||| ||||| | ||||||||||||| |||||| | || | |||||| ||
Sbjct 14220373 AAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGGCCGATGGGC 14220432
Query 147310 CGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAA 147367
|| || |||||| | | || || || | || |||| |||| || || |
Sbjct 14220433 CGGTGGCGCAGGTTGCT--GTTACGAGCCTCCTGGACCGGGTAGTAGTTGACGTCGATGA 14220490
Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427
||||||| || ||||| || || || | || | | || ||| ||| ||||| |
Sbjct 14220491 TCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAGTCATAGG 14220550
Query 147428 TCCCGTC-TTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCC 147486
|| || || | || || | || || || | |||||||| ||||| || |||
Sbjct 14220551 CGCCCTCGTTGTAGTCG-ACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCACACAGCC 14220609
Query 147487 GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT---GCTGCATTTTATG 147543
||| |||| || ||||| ||||| |||| ||||||||| ||||| |||
Sbjct 14220610 ACCTCATCGGGCGCG-AGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGC---GGATG 14220665
Query 147544 ACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGT 147603
|||| || | ||| ||||| || || ||||| ||||||| | |||||| | ||
Sbjct 14220666 GTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAGGGG 14220725
Query 147604 CCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACC 147660
||| |||||| || | || | ||| | ||| ||| | ||||| | |
Sbjct 14220726 TTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACC---ACAGCTTTTGCGCCTTGAGC 14220782
Query 147661 CGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCG 147720
|| || |||||| |||||| |||||||| ||| ||||||||||||
Sbjct 14220783 GTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCG 14220842
Query 147721 TAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCG 147780
||||| || || ||||| || |||| | || ||||| |||| ||| | ||| |
Sbjct 14220843 TAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTC 14220902
Query 147781 TTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTG 147840
| ||| || ||| || || || || | ||| || || | ||| ||||| || |
Sbjct 14220903 TCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGG 14220962
Query 147841 CAATCCTC---GGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTG 147896
||||| | || | ||||| || | | | || | | | | |||||||||
Sbjct 14220963 ATCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGGAACTCGA-ACACGTCGGCGTG 14221018
Query 147897 CCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATG 147953
||| || || | |||| ||| | || || ||| || || ||||||||||| |
Sbjct 14221019 CCACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTA 14221078
Query 147954 GCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT 148013
|| || ||||||| || || || | |||||| | | |||| | | |||||||||||
Sbjct 14221079 ACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGT 14221138
Query 148014 GGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCC 148073
| ||| | | ||| ||| || | ||| | || | ||| || |||||| |
Sbjct 14221139 GCCGGCGATGTAGGAGCCCGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGCCGGC 14221198
Query 148074 GTACTTTGA---TATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTC 148130
||| || |||||| | | | | || |||||| || |||||||||||
Sbjct 14221199 CATCTTGGAGATCATGGCACAGGTTTTG---AGGGTGTCGTAGATACCATCGATGCTGTC 14221255
Query 148131 GTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAA 148190
|| || | | | | || || ||||| ||| || | |||| || || |||
Sbjct 14221256 GTCCTTCATGTCGACCAGGAAGCACGACGACAGCTGGGCCTGGGGCGTGCCGGCGTTGAA 14221315
Query 148191 AAGGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATA 148248
|| |||||| ||||| || || | || | || ||| | | |||||||| |
Sbjct 14221316 GAGAGTGGGAGAGGCGTGGGTGAAGTACTTGCTCGA--CATGAGGTTGTACGTCTCGAGC 14221373
Query 148249 GCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGT 148308
|| ||||||| |||||| ||||| | ||||||||||||| ||||||||| ||
Sbjct 14221374 ACGCGCTCGATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGGGGG 14221433
Query 148309 CGTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACC 148367
|| ||| | | |||| || || |||||| || || || ||||| ||| | ||
Sbjct 14221434 CGCTCGACGATCTTG-CCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAGCC 14221492
Query 148368 AAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
|||||||| || | || || | || || |||||||||
Sbjct 14221493 AAAGTACTGATAGTTGAAGTCCCGGTCATAGACGATGGCCG 14221533
>seq67
Length=2709248
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || |||||||||||||| || |||||| ||| || ||||| || || |
Sbjct 458482 GACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATCCTCCAGCTGCTTGCCCGCG 458541
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || ||||| || || ||||| ||||| || ||||| || || || |
Sbjct 458542 AAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGGATCTTGCTCTTTACG 458601
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||||| | || ||||||| ||| | ||||| ||||||| || ||
Sbjct 458602 TTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTC 458661
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 458662 ACGAAGATCTGCATG 458676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610723388800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |