Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq45 131 2e-25 >seq45 Length=5506958 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||| | |||||||| ||||| | | | ||||| | ||||| || ||| Sbjct 4038728 ATCTCGAGATCCGGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACG 4038669 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| || ||||||||| ||||| |||| | ||| | ||| ||| ||| || Sbjct 4038668 TGGTCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCG 4038609 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 ||||||| | ||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 4038608 CAGGCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCC 4038549 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | |||| |||||| |||||||| Sbjct 4038548 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 4038514 Score = 113 bits (124), Expect = 5e-20 Identities = 192/273 (70%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| ||||||||||| |||||| ||| |||| |||| ||| |||||| Sbjct 4038233 AGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCTTTGCGTCCTTGTACTCGGCGCCAAAG 4038174 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 || | ||||||||||||||| || || || ||||||||| | | |||| | || || Sbjct 4038173 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTGC-TGCAGGCC 4038115 Query 147352 GCCCG-CTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCG 147408 | || ||||| |||||| | || |||| | |||||||||||| ||| || | | || Sbjct 4038114 GAGCGAGTTGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACCCCAGCCTCGCT 4038055 Query 147409 GA-GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCC 147467 | | || || ||| ||| |||| | |||||| |||||||| | || | Sbjct 4038054 CAGGGGCGCCGACGAG---GTGCTGCCCGACACGAACCACAGCAGCTCGAGGATGACGGC 4037998 Query 147468 CCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | | |||||| | |||||| |||||||| || Sbjct 4037997 GCGCGTAAAGACGCGCTTGGTCGTCAGCAGCGG 4037965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487416512000