Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq45 131 2e-25
>seq45
Length=5506958
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|||| ||| | |||||||| ||||| | | | ||||| | ||||| || |||
Sbjct 4038728 ATCTCGAGATCCGGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACG 4038669
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|||| || ||||||||| ||||| |||| | ||| | ||| ||| ||| ||
Sbjct 4038668 TGGTCGACGTAGACGTGGGCGTCGCCCATGACGTGGGTCAGCGACCCGGGCACGAGGTCG 4038609
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
||||||| | ||||| || |||||||||||||| || |||||||||||||| |||
Sbjct 4038608 CAGGCGTGGGCGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCC 4038549
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
||||||||||| | |||| |||||| ||||||||
Sbjct 4038548 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 4038514
Score = 113 bits (124), Expect = 5e-20
Identities = 192/273 (70%), Gaps = 8/273 (3%)
Strand=Plus/Minus
Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291
|||||||| ||||||||||| |||||| ||| |||| |||| ||| ||||||
Sbjct 4038233 AGCTGGTCGACGCCCTGGCCGGCGTAGTCGGTCTTTGCGTCCTTGTACTCGGCGCCAAAG 4038174
Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351
|| | ||||||||||||||| || || || ||||||||| | | |||| | || ||
Sbjct 4038173 TGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACGTCGCGGTGC-TGCAGGCC 4038115
Query 147352 GCCCG-CTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC--CTTGGCG 147408
| || ||||| |||||| | || |||| | |||||||||||| ||| || | | ||
Sbjct 4038114 GAGCGAGTTGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATGCGCACCCCAGCCTCGCT 4038055
Query 147409 GA-GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCC 147467
| | || || ||| ||| |||| | |||||| |||||||| | || |
Sbjct 4038054 CAGGGGCGCCGACGAG---GTGCTGCCCGACACGAACCACAGCAGCTCGAGGATGACGGC 4037998
Query 147468 CCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500
| | |||||| | |||||| |||||||| ||
Sbjct 4037997 GCGCGTAAAGACGCGCTTGGTCGTCAGCAGCGG 4037965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487416512000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |