Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 179 4e-40 seq67 116 4e-21 seq23 105 7e-18 >seq1 Length=15654088 Score = 179 bits (198), Expect = 4e-40 Identities = 903/1420 (64%), Gaps = 38/1420 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | ||||||| || || ||||| ||||| |||| || || | Sbjct 14221429 CAGCACATGATCATGCGCGTCGCTGTCGGCATCTGGGGCGACAACATCGAGCGCGTGCTC 14221370 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || |||||| | | ||||| || | || || ||||| || ||||| | || | Sbjct 14221369 GAGACGTACAACCTCATGTCGAGCAAGTACTTCACCCACGCCTCTCCCACTCTCTTCAAC 14221310 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || ||||| | | | || |||| ||||| || || | |||| || |||||| Sbjct 14221309 GCCGGCACGCCCCAGGCCCAGCTGTCGTCGTGCTTCCTGGTCGACATGAAGGACGACAGC 14221250 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 ||||| || || ||| |||| || || |||| || ||||| | |||||| Sbjct 14221249 ATCGATGGTATCTACGACACCCTCAAAACCTGTGCCATGATCTCCAAGATGGCCGGCGGT 14221190 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || || || || | || | | ||||||| || | ||||| ||||||||| Sbjct 14221189 ATCGGCCTCAATATCCACCGCATCCGCGCCACGGGCTCCTACATCGCCGGCACCAACGGC 14221130 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | | ||| ||| | | ||||||| | || || ||||| ||| ||| || | || ||| Sbjct 14221129 ACATCCAACGGCATCGTGCCCATGCTACGTGTTTTCAACAACACGGCCCGTTACGTCGAC 14221070 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || |||||| |||||| |||||||||| |||||||||||||||| ||| Sbjct 14221069 CAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATCTGGAGCCGTGGCACGCCGAC 14221010 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | | || | || | ||||| ||| || || || | | || ||||| Sbjct 14221009 GTGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGCGCCCGCGAC 14220950 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA 8100 || ||| | | | ||| | || || || || |||| ||| ||| | ||| | Sbjct 14220949 CTTTTCCTGGCCCTATGGATCCCAGACCTATTCATGAAGCGGGTTGAGAAGAACGGCGAC 14220890 Query 8101 TGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTT 8160 ||| |||||||||||||| | |||||| || | || ||||| | || Sbjct 14220889 TGGACGCTCATGTGCCCCAACGAGTGCCCTGGCCTAGCAGACTGCTACGGCGACGAGTTC 14220830 Query 8161 GAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAG----TGAAAGC 8216 || |||||| || | ||||| | || ||| | | || ||||| | || || Sbjct 14220829 GAGGCTTTGTACGAAAAGTACGAGCGTGAGGGC----AAGGGCCGCAAGACGCTCAAGGC 14220774 Query 8217 GCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCT 8276 || | ||| ||||| |||| || | ||| || || | || | |||||| Sbjct 14220773 GCAAAAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATGCT 14220714 Query 8277 GTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAG 8336 |||||||||| |||||| ||| ||||| || | ||| |||||||||| | || Sbjct 14220713 GTACAAAGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTC 14220654 Query 8337 CAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCT 8396 || |||||| | || || || ||||| ||||||||| || ||||| || ||||| || Sbjct 14220653 TAACCTGTGCACCGAGATCGTCGAGTAC-TCGCGCCCGATGAGGTGGCTGTGTGCAACCT 14220595 Query 8397 AGCGTCGGTGTGTTTAAACGC-GTTCGTTGATCGAC-GCTCAAACACTTACGACTTTGAA 8454 |||||| || | ||| ||| || || | || | | | || ||||| Sbjct 14220594 GGCGTCGTTG-GCGCTGCCGCAGTTTGTCGA-CTACAACGAGGGCGCCTATGACTTCCGG 14220537 Query 8455 CAATTGAAAAACGCCGTG---CAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTC 8511 | || ||| ||| || || || || ||| | | ||||| || ||| Sbjct 14220536 AAGCTG---CACGAGGTGACCCAGGTCGTCGTTCGTAATCTTAACAAGATCATCGACGTC 14220480 Query 8512 AATTTTTATCCCTTGGAAGAAGCGCGCGTATC--GAACATGCGCCACAGACCCGTTGGCG 8569 || | || || | | || || |||| | ||| |||||||| | ||| | ||| Sbjct 14220479 AACTACTACCCGGTCCAGGA--GGCTCGTAACAGCAACCTGCGCCACCGGCCCATCGGCC 14220422 Query 8570 TGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAG 8629 | |||||||| ||||||||||| || || | ||||||| |||| ||| | | Sbjct 14220421 TAGGCGTGCAGGGTCTGGCCGATGCCTTCCTAGCGCTGCGCCTGCCCTTCGAGTCTCCCG 14220362 Query 8630 AAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCA 8689 | || ||| |||||||| | || || || | || ||| ||| | ||| Sbjct 14220361 AGGCTCGCGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCCGCCCTGACCGCCT 14220302 Query 8690 GCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCC 8749 || | || || || || |||||| ||| | |||| |||| |||| | | Sbjct 14220301 CGTGCGAGCTGGCGCGCGAGCAGGGCACCTACTCGACATACGAGGGCTCGCCTG--TGTC 14220244 Query 8750 GC--GGAATATTGCAATACGACATGTGGAATGTCACGCC--CACCTCTTTGTGGAATTGG 8805 || || || |||| |||||||||||||| |||| ||| | || || ||| | || Sbjct 14220243 GCAGGGCATCCTGCAGTACGACATGTGGAACGTCAAGCCGTCGGAGCTCTG-GGACTGGG 14220185 Query 8806 AG-CGATTTGAAACGC-AAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTT 8863 || || | || || | || || |||| ||||||| |||||| | ||||| Sbjct 14220184 AGTCGCT---CAAGGCGGACATCAAGCAGCACGGTGTGCGCAACTCGCTGCTTGTGGCGC 14220128 Query 8864 ACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCA 8923 |||||||||||||| || | || || |||| |||||||| | ||| ||||| | || Sbjct 14220127 CCATGCCCACCGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACA 14220068 Query 8924 CCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTT 8963 | |||| | ||| | | || ||| | |||||||| || Sbjct 14220067 CGTCCAACATCTACCAGCGTCGCGTGCTCGCCGGCGAGTT 14220028 >seq67 Length=2709248 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || ||| ||||| || |||||||||||| | Sbjct 458905 CCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 458964 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| |||||||| || || || || |||| |||||||| ||||| || Sbjct 458965 AGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 459024 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| || || ||||| Sbjct 459025 ATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACC 459084 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | ||||| |||||||| ||||| Sbjct 459085 TCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT- 134541 || ||| || | || |||| ||| ||||| || || || ||||| ||||||||||||| Sbjct 458445 CTGTCCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 458504 Query 134542 CGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGG 134601 || ||| ||| | || || ||||| ||||| || || |||| |||||||| || | Sbjct 458505 CGACAA-GGTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCG 458563 Query 134602 GCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATT 134661 | || ||||| || || || || || || || || || | || ||||| |||| Sbjct 458564 GAGGGATGCCCTCCTTATCCTGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATT 458623 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || ||||| || |||||||| || || || || || ||||| || ||||| Sbjct 458624 CGACTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 458675 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | |||||||| ||||| || || ||||| ||||||||||| Sbjct 459133 CCTCCACGGAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAG 459192 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| ||||| || ||||| || || || | |||||||| ||||| || Sbjct 459193 AGGGTCCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 459252 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || ||||| || ||||| Sbjct 459253 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACC 459312 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 459313 TCGAGGGTGATGGTCTTGCCCGT 459335 >seq23 Length=7462253 Score = 105 bits (116), Expect = 7e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| |||||||||||| ||||| || |||||||||||| | ||| | Sbjct 7209988 AGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 7209929 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||||||||| ||||| |||| |||||||| || || || ||||| || Sbjct 7209928 CCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGGATGCCCTCC 7209870 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||| ||| ||||| || || || Sbjct 7209869 TTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCACCTCAAGGGTG 7209810 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || || || || ||||| Sbjct 7209809 ATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 7209772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397894601600