Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 242 5e-59 seq12 109 7e-19 >seq1 Length=15654088 Score = 242 bits (268), Expect = 5e-59 Identities = 1173/1839 (64%), Gaps = 40/1839 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || ||||||||||| ||||||||||| || |||||||| | | ||||| || | Sbjct 14219710 CGCAGGTAGTACATGCCCGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTT 14219769 Query 117897 AACTTGGAGAGGGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 | |||| | ||| || || | |||| || ||| | || ||||| |||||||| Sbjct 14219770 ATCTTGCCCATGGTGGG-CTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAA 14219828 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCT 118015 | || || || |||||||| | | || | | ||| ||||| || ||| | Sbjct 14219829 GGCGCCGCGGTCAGCCGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTT 14219888 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075 ||| ||| ||| |||| || ||||| |||| || |||||||| || ||| | Sbjct 14219889 GTACAGGCGCTTGGTATCCTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGC 14219948 Query 118076 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 118135 || ||| | | |||||| | | ||||| | |||| || || |||| || ||| Sbjct 14219949 GATGATGCGGTTCTTCATGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAG 14220008 Query 118136 --ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 ||| | |||| || ||||| || ||||| ||| | | | ||||| |||| | Sbjct 14220009 CCATGGGT--TGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGAC 14220066 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| ||||| |||||||| ||||| |||| || || | ||| ||| ||||||||| Sbjct 14220067 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATG 14220126 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || |||| || || ||| || | ||| | | | | ||| ||||||| | ||| Sbjct 14220127 GGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCC 14220186 Query 118314 CAGTCGTAGTTGAGCT---TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370 ||||| | ||||| | || | | |||||| || |||| ||||| || || Sbjct 14220187 CAGTCCCA---GAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGC 14220243 Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 118430 ||| | ||||| ||||| ||||| || | ||||| | ||||| ||| | Sbjct 14220244 GACACAGGCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCGCACGAG 14220303 Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490 || ||||| ||||| || || || ||||| || | || | | |||||| Sbjct 14220304 GCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCG 14220363 Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550 || || || | || || | | || |||| || ||||| || || || ||| Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423 Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610 || || || || || | || || || ||||| || || || || | || Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACG 14220483 Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670 ||||| | | | || ||||| ||| |||| || | || || ||||| | | Sbjct 14220484 TCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAG 14220543 Query 118671 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 118730 ||| | || | | | |||| ||| || || || | |||||||| || ||| Sbjct 14220544 TCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCAC 14220603 Query 118731 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTA 118790 |||| |||||| | | |||||| | || || ||||||| ||| || || Sbjct 14220604 ACAGCCACCTCATCGGGCGC-GAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGG 14220662 Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850 |||||||||| |||||| || || ||| ||| || || ||||| |||||| | Sbjct 14220663 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAG 14220722 Query 118851 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCAC 118909 || | || ||||| || |||| || ||| || || | ||| | | | || || | Sbjct 14220723 GGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTG--- 14220779 Query 118910 AGTGGCGT-TGGCTC-GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 118967 || | | | ||| | ||||| |||||||||| ||| | || || ||||| || Sbjct 14220780 AGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCG 14220839 Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027 || | |||| || || || || | ||||| | ||| | ||| | || | Sbjct 14220840 CCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTC 14220899 Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087 | |||||||||||||||||| |||||||||||||| || ||| ||| || || || | Sbjct 14220900 TTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCG 14220959 Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147 || || || | || || || |||| || | || || | | || |||||| Sbjct 14220960 CGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGC 14221019 Query 119148 CACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACA 119201 ||||| ||||| || | || | | || ||| | | ||| |||||| || Sbjct 14221020 CACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCGACG 14221076 Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261 || | || ||| ||| || ||||| ||||| || | ||| || | |||| ||| || Sbjct 14221077 TAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTG 14221136 Query 119262 GT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319 || || ||| || ||| | |||| | || |||||| | | || ||||| | Sbjct 14221137 GTGCCGGCGATGTAGGAGCC--CGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGC 14221194 Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379 | ||| ||| ||||| || || |||| || ||||||| |||||||| || Sbjct 14221195 CGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGT 14221254 Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGTTG 119438 | |||| | ||| |||||||| ||||| || ||||| ||| || || |||||| Sbjct 14221255 CGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTG-GGCCTGGGGCGTGCCGGCGTTG 14221313 Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCA 119496 |||||||| || | |||||| |||| || |||| ||||| || ||| ||||| | Sbjct 14221314 AAGAGAGTGGGAGAGGCGTGGGTGAA-GTA-CTTGCTCGACATGAGGTTGTACGTCTCGA 14221371 Query 119497 AGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 119555 ||| || | |||| || || || |||| | ||| ||||| | ||||| ||| Sbjct 14221372 GCACGCGCTCG-ATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGG 14221430 Query 119556 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 119615 || || | | | || |||||| | | ||||| ||||| |||||||| Sbjct 14221431 GGGCGCTCGACGATCTTGCCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAG 14221490 Query 119616 CCAAAATAGCCAAAATCGTAGTCCCGCTTCGTGACGATG 119654 ||||| || | | | | ||||||| | ||||||| Sbjct 14221491 CCAAAGTACTGATAGTTGAAGTCCCGGTCATAGACGATG 14221529 Score = 91.5 bits (100), Expect = 2e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 180869 AGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGT 180928 ||||||| || | |||||||||||| || ||||| |||||||| | || || |||| Sbjct 7239648 AGATGTTGGTAAGCTTGGCACCGTAACCGTTGCGGCCACCAACGGTCTTCAGCTCCTTGT 7239707 Query 180929 CATCGTAGTTTGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCT 180988 ||||||| || | || |||||||||||||| || | ||||| || | | | | || Sbjct 7239708 CATCGTAATTGGAACCAGTGAGGAGGTGACCGAAAATCAGTTCGGGGATGTAGACCTTCT 7239767 Query 180989 CCTTTTCGTGCAT 181001 |||| |||||||| Sbjct 7239768 CCTTCTCGTGCAT 7239780 >seq12 Length=9596913 Score = 109 bits (120), Expect = 7e-19 Identities = 160/225 (71%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| ||| ||| |||||||||||||| |||||||| || || |||||| || || Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| || || |||||||||| |||||| || | ||| | || ||||||||| Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC--- 130191 ||||| || || || |||| ||| ||| ||||||| ||||| | || Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGCGAGGCAAAGG---TCGACTTCTTGTCGGA 6218715 Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 || |||||||| ||||| | ||||| || ||| || ||||| Sbjct 6218716 AATCCACTTCAAAGCCCAGTCGGCCTTCTTACGGATGCATGGGAC 6218760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434581564800