Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 242 5e-59
seq12 109 7e-19
>seq1
Length=15654088
Score = 242 bits (268), Expect = 5e-59
Identities = 1173/1839 (64%), Gaps = 40/1839 (2%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| ||||||||||| || |||||||| | | ||||| || |
Sbjct 14219710 CGCAGGTAGTACATGCCCGTCTTGAGGCCTAGCTTCCAGCCGGCGAAGTGCATAGACGTT 14219769
Query 117897 AACTTGGAGAGGGTTGGACTTTC-CATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955
| |||| | ||| || || | |||| || ||| | || ||||| ||||||||
Sbjct 14219770 ATCTTGCCCATGGTGGG-CTCGCGCATGTGGATGTTGAGCGACTGCGATTGGTCGATGAA 14219828
Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCT 118015
| || || || |||||||| | | || | | ||| ||||| || ||| |
Sbjct 14219829 GGCGCCGCGGTCAGCCGCCATCTGGACGACGGTGCGCTGCGAGATCTCCCAGACCGTCTT 14219888
Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075
||| ||| ||| |||| || ||||| |||| || |||||||| || ||| |
Sbjct 14219889 GTACAGGCGCTTGGTATCCTCGGGGATGCTGGCGATGTTCTGGATGGAGCCGCCCTCGGC 14219948
Query 118076 GACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG 118135
|| ||| | | |||||| | | ||||| | |||| || || |||| || |||
Sbjct 14219949 GATGATGCGGTTCTTCATGTTGTCGGACCACAAGCCAAGCTCGACCAGGTCCTTCAGGAG 14220008
Query 118136 --ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193
||| | |||| || ||||| || ||||| ||| | | | ||||| |||| |
Sbjct 14220009 CCATGGGT--TGACGACCTGGAACTCGCCGGCGAGCACGCGACGCTGGTAGATGTTGGAC 14220066
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
||||| ||||| |||||||| ||||| |||| || || | ||| ||| |||||||||
Sbjct 14220067 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGACGTGCTGGCGGTGGGCATG 14220126
Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313
|| |||| || || ||| || | ||| | | | | ||| ||||||| | |||
Sbjct 14220127 GGCGCCACAAGCAGCGAGTTGCGCACACCGTGCTGCTTGATGTCCGCCTTGAGCGACTCC 14220186
Query 118314 CAGTCGTAGTTGAGCT---TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
||||| | ||||| | || | | |||||| || |||| ||||| || ||
Sbjct 14220187 CAGTCCCA---GAGCTCCGACGGCTTGACGTTCCACATGTCGTACTGCAGGATGCCCTGC 14220243
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 118430
||| | ||||| ||||| ||||| || | ||||| | ||||| ||| |
Sbjct 14220244 GACACAGGCGAGCCCTCGTATGTCGAGTAGGTGCCCTGCTCGCGCGCCAGCTCGCACGAG 14220303
Query 118431 GCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 118490
|| ||||| ||||| || || || ||||| || | || | | ||||||
Sbjct 14220304 GCGGTCAGGGCGGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCGCGAGCCTCG 14220363
Query 118491 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 118550
|| || || | || || | | || |||| || ||||| || || || |||
Sbjct 14220364 GGAGACTCGAAGGGCAGGCGCAGCGCTAGGAAGGCATCGGCCAGACCCTGCACGCCTAGG 14220423
Query 118551 CCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTA 118610
|| || || || || | || || || ||||| || || || || | ||
Sbjct 14220424 CCGATGGGCCGGTGGCGCAGGTTGCTGTTACGAGCCTCCTGGACCGGGTAGTAGTTGACG 14220483
Query 118611 TCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAA 118670
||||| | | | || ||||| ||| |||| || | || || ||||| | |
Sbjct 14220484 TCGATGATCTTGTTAAGATTACGAACGACGACCTGGGTCACCTCGTGCAGCTTCCGGAAG 14220543
Query 118671 TCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACAC 118730
||| | || | | | |||| ||| || || || | |||||||| || |||
Sbjct 14220544 TCATAGGCGCCCTCGTTGTAGTCGACAAACTGCGGCAGCGCCAACGACGCCAGGTTGCAC 14220603
Query 118731 ACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTA 118790
|||| |||||| | | |||||| | || || ||||||| ||| || ||
Sbjct 14220604 ACAGCCACCTCATCGGGCGC-GAGTACTCGACGATCTCGGTGCACAGGTTAGAGCTGCGG 14220662
Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850
|||||||||| |||||| || || ||| ||| || || ||||| |||||| |
Sbjct 14220663 ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCTTTGTACAGCATGAAG 14220722
Query 118851 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCAC 118909
|| | || ||||| || |||| || ||| || || | ||| | | | || || |
Sbjct 14220723 GGGTTGCCAGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTG--- 14220779
Query 118910 AGTGGCGT-TGGCTC-GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCA 118967
|| | | | ||| | ||||| |||||||||| ||| | || || ||||| ||
Sbjct 14220780 AGCGTCTTGCGGCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCG 14220839
Query 118968 CCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCC 119027
|| | |||| || || || || | ||||| | ||| | ||| | || |
Sbjct 14220840 CCGTAGCAGTCTGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTC 14220899
Query 119028 TCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAG 119087
| |||||||||||||||||| |||||||||||||| || ||| ||| || || || |
Sbjct 14220900 TTCTCAACCCGCTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCG 14220959
Query 119088 CGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGC 119147
|| || || | || || || |||| || | || || | | || ||||||
Sbjct 14220960 CGGATCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGC 14221019
Query 119148 CACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACA 119201
||||| ||||| || | || | | || ||| | | ||| |||||| ||
Sbjct 14221020 CACGGCTCCAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCGACG 14221076
Query 119202 TACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTT 119261
|| | || ||| ||| || ||||| ||||| || | ||| || | |||| ||| ||
Sbjct 14221077 TAACGGGCCGTGTTGTTGAAAACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTG 14221136
Query 119262 GT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 119319
|| || ||| || ||| | |||| | || |||||| | | || ||||| |
Sbjct 14221137 GTGCCGGCGATGTAGGAGCC--CGTGGCGCGGATGCGGTGGATATTGAGGCCGATACCGC 14221194
Query 119320 CTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 119379
| ||| ||| ||||| || || |||| || ||||||| |||||||| ||
Sbjct 14221195 CGGCCATCTTGGAGATCATGGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGT 14221254
Query 119380 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGTTG 119438
| |||| | ||| |||||||| ||||| || ||||| ||| || || ||||||
Sbjct 14221255 CGTCCTTCATGTCGACCAGGAAGCACGACGACAGCTG-GGCCTGGGGCGTGCCGGCGTTG 14221313
Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCA 119496
|||||||| || | |||||| |||| || |||| ||||| || ||| ||||| |
Sbjct 14221314 AAGAGAGTGGGAGAGGCGTGGGTGAA-GTA-CTTGCTCGACATGAGGTTGTACGTCTCGA 14221371
Query 119497 AGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 119555
||| || | |||| || || || |||| | ||| ||||| | ||||| |||
Sbjct 14221372 GCACGCGCTCG-ATGTTGTCGCCCCAGATGCCGACAGCGACGCGCATGATCATGTGCTGG 14221430
Query 119556 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 119615
|| || | | | || |||||| | | ||||| ||||| ||||||||
Sbjct 14221431 GGGCGCTCGACGATCTTGCCGTCGAGCTTGAGCAGGTACGAGCGCTCCAGGGTCTTGAAG 14221490
Query 119616 CCAAAATAGCCAAAATCGTAGTCCCGCTTCGTGACGATG 119654
||||| || | | | | ||||||| | |||||||
Sbjct 14221491 CCAAAGTACTGATAGTTGAAGTCCCGGTCATAGACGATG 14221529
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 180869 AGATGTTCGTCAACTTGGCACCGTAGCCATTGCGTCCACCAACAATTCTCTTCTTGTTGT 180928
||||||| || | |||||||||||| || ||||| |||||||| | || || ||||
Sbjct 7239648 AGATGTTGGTAAGCTTGGCACCGTAACCGTTGCGGCCACCAACGGTCTTCAGCTCCTTGT 7239707
Query 180929 CATCGTAGTTTGTACTCGTGAGGAGGTGACCAAAGGTAAGTTCTGGATTCCAAATATCCT 180988
||||||| || | || |||||||||||||| || | ||||| || | | | | ||
Sbjct 7239708 CATCGTAATTGGAACCAGTGAGGAGGTGACCGAAAATCAGTTCGGGGATGTAGACCTTCT 7239767
Query 180989 CCTTTTCGTGCAT 181001
|||| ||||||||
Sbjct 7239768 CCTTCTCGTGCAT 7239780
>seq12
Length=9596913
Score = 109 bits (120), Expect = 7e-19
Identities = 160/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| ||| ||| |||||||||||||| |||||||| || || |||||| || ||
Sbjct 6218539 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCC 6218598
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||| || || |||||||||| |||||| || | ||| | || |||||||||
Sbjct 6218599 AGGCATCAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 6218658
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC--- 130191
||||| || || || |||| ||| ||| ||||||| ||||| | ||
Sbjct 6218659 ACCCTCAACGGCGGCAAAGGCAATGAGCCGCGAGGCAAAGG---TCGACTTCTTGTCGGA 6218715
Query 130192 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236
|| |||||||| ||||| | ||||| || ||| || |||||
Sbjct 6218716 AATCCACTTCAAAGCCCAGTCGGCCTTCTTACGGATGCATGGGAC 6218760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434581564800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |