Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq67 104 7e-17
>seq67
Length=2709248
Score = 104 bits (114), Expect = 7e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605
||| || || || || ||||| || | || || || || || || || || || |||||
Sbjct 458712 CTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAA 458771
Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665
||| | |||||||||||| || || || || || || || ||||| || | || || ||
Sbjct 458772 GATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTT 458831
Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| |||| || |||| || ||||| || || | ||||| ||||| || || || ||
Sbjct 458832 GTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGAC 458891
Query 140726 AAAAATCTGCAT 140737
|| ||||||||
Sbjct 458892 GAAGATCTGCAT 458903
Score = 100 bits (110), Expect = 9e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || || || || || ||||||||||| || || || ||
Sbjct 459129 CATACCTCCACGGAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTC 459188
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || || ||||| || ||||| ||||| || || ||||| || ||
Sbjct 459189 CGAGAGGGTCCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGG 459248
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| ||||| || || ||||| || || | || || || || || | ||| || | ||
Sbjct 459249 AGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTC 459308
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGT 140719
|| || || || | ||||| || || | |||
Sbjct 459309 CACCTCGAGGGTGATGGTCTTGCCCGTCACTGT 459341
Score = 93.3 bits (102), Expect = 1e-13
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||| ||||| | | || || || || || || ||| || || || || || ||
Sbjct 458901 CATACCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 458960
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || || || || || || || ||||| || || ||||| || ||
Sbjct 458961 GGAAAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGG 459020
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || |||||||| || | || ||||| || || | || || | ||
Sbjct 459021 AGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTC 459080
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || | || | ||||| || || || ||||| || |||||||||||
Sbjct 459081 CACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252846864240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |