Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 316 2e-81
seq12 107 2e-18
>seq1
Length=15654088
Score = 316 bits (350), Expect = 2e-81
Identities = 533/768 (69%), Gaps = 20/768 (3%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||||||||| | || ||| || ||| || | ||| || | |||||||||
Sbjct 14221419 TCATGCGCGTCGCTGTCGGCATCTGGGGCGACAACATCGAGCGCGTGCTCGAGACGTACA 14221360
Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
|| | ||| ||| |||||||| || |||||| | || || || |||||||| || |
Sbjct 14221359 ACCTCATGTCGAGC---AAGTACTTCACCCACGCCTCTCCCACTCTCTTCAACGCCGGCA 14221303
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
|| || | ||| ||||| ||||||||||| | |||||||| ||| ||||| |
Sbjct 14221302 CGCCCCAGGCCCAGCTGTCGTCGTGCTTCCTGGTCGACATGAAGGACGACAGCATCGATG 14221243
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG-- 53427
| |||||||| || ||||| |||||| ||||||||| | | || ||||||||
Sbjct 14221242 GTATCTACGACACCCTCAAAACCTGTGCCATGATCTCCAAGATGGCCGGCGGTATCGGCC 14221183
Query 53428 ----TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCG 53483
||||||| || |||| || | ||| | ||| || || ||||||
Sbjct 14221182 TCAATATCCACCGCA------TCCGCGCCACGGGCTCCTACATCGCCGGCACCAACGGCA 14221129
Query 53484 TCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACC 53543
|| | || |||||||| ||||| || || ||||||||||||||||| |||||| |||
Sbjct 14221128 CATCCAACGGCATCGTGCCCATGCTACGTGTTTTCAACAACACGGCCCGTTACGTCGACC 14221069
Query 53544 AGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACA 53603
||||||| |||||| || | || |||||||| || ||||||||||||||||||
Sbjct 14221068 AGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATCTGGAGCCGTGGCACGCCGACG 14221009
Query 53604 TTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACC 53663
| | ||||| ||||| ||||| ||| || || | || ||||| ||| ||| ||||
Sbjct 14221008 TGTTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGATCCGCGCCCGCGACC 14220949
Query 53664 TGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGT 53723
| || || || ||||| || ||||| |||||| | ||| |||||| ||| || |
Sbjct 14220948 TTTTCCTGGCCCTATGGATCCCAGACCTATTCATGAAGCGGGTTGAGAAGAACGGCGACT 14220889
Query 53724 GGTACCTGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTT 53782
|| || |||||||| ||||||||||| ||||| ||| || |||||| || |||||
Sbjct 14220888 GGACGCTCATGTGCCCCAACGAGTGCCCTGGCCTAGCAGACTG-CTACGGCGACGAGTTC 14220830
Query 53783 AACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGT 53842
| | |||| | ||||| | ||||| | |||| | |||||||||
Sbjct 14220829 GAGGCTTTGTACGAAAAGTACGAGCGTGAGGGCAAGGGCCGCAAGACGCTCAAGGCGCAA 14220770
Query 53843 GAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTAC 53902
|| | ||| |||| |||||| || |||| ||||| || | || | |||| |||
Sbjct 14220769 AAGCTGTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATGCTGTAC 14220710
Query 53903 AAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950
|| || |||| |||||||||||||||||| | ||| ||||
Sbjct 14220709 AAAGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATC 14220662
Score = 158 bits (174), Expect = 1e-33
Identities = 308/452 (68%), Gaps = 6/452 (1%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||| || || |||||||||||||| | ||| || | || || ||||| | |
Sbjct 7237580 CCAGTGCCGATACCGTCGGCACCGTTGACCAGGACCATAGGAATAACGGGTGCGTACACC 7237639
Query 151936 TCCGGCTCCA---CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992
| ||||| | ||| || |||||||| | || | | ||| | | |||
Sbjct 7237640 TTGGGCTCAATAACCT--TG-CCGTCATCTACTTGGTGCTGTAGAACAGGCTCGTCCATG 7237696
Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
| | ||| | || || | | || || ||| || ||||||||||| | ||||||
Sbjct 7237697 GCAGAGAAAACGCGCCGCGCAAATGGTGACAGACGAGTAAAGATGTATCGAGCGCTGGCG 7237756
Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112
||||| ||||| | || || | || || | ||| |||||||||| ||| | |
Sbjct 7237757 GCATCAGATCCACCGGAGAGGCGAGAACCGAAGTTGCCACTGGGCTCGAGGCAGTTCACG 7237816
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
||||| | || || |||||||||||||| ||||| || ||||| || |||
Sbjct 7237817 TTGTTAGACCCGACAAAATTCTGAGCCAAGCCGACAATGGTCTGCTGCAACGATGCCTCA 7237876
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232
|||||||| || || | |||||||| || ||| || ||||||| | |||||| |||||
Sbjct 7237877 CCGTGGTGGTAGGCGGCCTGCTCCGAGACGTAACCAGCCAACTCGACGACCTTCTTGTCC 7237936
Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292
| ||||||| ||||| || ||| | || ||||||||||| || |||| |||
Sbjct 7237937 TTTACCAGGTTCCGCTTGAAACTCGCGAAGATGACCTTGCGCTGTCCAGGCTTCAGGCCG 7237996
Query 152293 TCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| | ||| ||| ||||| ||| || ||||
Sbjct 7237997 TCGATCACTGAAGGTATCGAGCGCATGTTGTC 7238028
Score = 140 bits (154), Expect = 4e-28
Identities = 218/310 (70%), Gaps = 4/310 (1%)
Strand=Plus/Plus
Query 117293 GGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGC 117352
|||| || ||||| || ||||| |||| ||| || ||||| ||||| | || ||
Sbjct 7237721 GGTGACAGACGAGTAAAGATGTATCGAGCGCTGGCGGCATCAGATCCACCGGAGAGGCGA 7237780
Query 117353 GTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGA 117412
| |||||| | ||||| ||||| | | ||||| |||||| | || ||||| || |||
Sbjct 7237781 GAACCGAAGTTGCCACTGGGCTCGAGGCAGTTCACGTTGTTAGACCCGACAAAATTCTGA 7237840
Query 117413 GCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCC 117472
|||||| |||||| || || | |||||||| ||||| || || | |||||||
Sbjct 7237841 GCCAAGCCGACAATGGTCTGCTGCAACGATGCCTCACCGTGGTGGTAGGCGGCCTGCTCC 7237900
Query 117473 GCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGC 117530
| ||||| || |||| || | |||||| |||| | || ||||||| ||||| |
Sbjct 7237901 GAGACGTAACCAGCCAACTCGACGACCTTCTTGTCCTTTAC--CAGGTTCCGCTTGAAAC 7237958
Query 117531 AGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAAC 117590
|| | || ||||||||||| | |||||||| || || ||| ||| ||||| |
Sbjct 7237959 TCGCGAAGATGACCTTGCGCTGTCCAGGCTTCAGGCCGTCGATCACTGAAGGTATCGAGC 7238018
Query 117591 GCTTGATGTC 117600
|| || ||||
Sbjct 7238019 GCATGTTGTC 7238028
Score = 140 bits (154), Expect = 4e-28
Identities = 544/838 (65%), Gaps = 24/838 (3%)
Strand=Plus/Minus
Query 55106 AAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAAT 55165
||||| ||||| ||||| | || || ||| || || ||| | |||||||| ||
Sbjct 14220536 AAGCTGCACGAGGTGACCCAGGTCGTCGTTCGTAATCTTAACAAGATCATCGACGTCAAC 14220477
Query 55166 TACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGT 55225
||||||||| | | ||| || || |||||| || ||||||||||||| | | ||
Sbjct 14220476 TACTACCCGGTCCAGGAGGCTCGTAACAGCAACCTGCGCCACCGGCCCATCGGCCTAGGC 14220417
Query 55226 GTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCGGAACCTGCT 55285
|| ||||| ||||||| |||| | ||| | |||||||||| || |||
Sbjct 14220416 GTGCAGGGTCTGGCCGATGCCTTCCTAGCGCTGCGCCTGCCCTTCGAGTCTCCCGAGGCT 14220357
Query 55286 CGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAGTCGTG 55344
|| || | ||| || | ||||| || | ||||||| || || || | |||||
Sbjct 14220356 CGCGAGCTCAACAAGCAGATCTTTGAGAC-CATCTACCACGCCGCCCTGACCGCCTCGTG 14220298
Query 55345 TCATCTGGCTAT-GAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAGCTGACA-AG 55402
| ||||| |||| |||| |||||| ||| | | | ||||| | || | ||
Sbjct 14220297 CGAGCTGGCGCGCGAGC-AGGGCACCTACTCGACATACGAGGGCTCGCCTG-TGTCGCAG 14220240
Query 55403 GGACTTCTCCAGTTCGATCTATGG---GGCAAG---TCTGACCCCATG---TTTGACAAG 55453
|| | || |||| ||| | ||| | |||| || || | | | | || |
Sbjct 14220239 GGCATCCTGCAGTACGACATGTGGAACGTCAAGCCGTCGGAGCTCTGGGACTGGGAGTCG 14220180
Query 55454 TTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCA 55513
| ||| ||||| | | || | |||||||| ||||| |||||||| |||||
Sbjct 14220179 CTCAAGGCGGACATCAAGCAGCACGGTGTGCGCAACTCGCTGCTTGTGGCGCCCATGCCC 14220120
Query 55514 ACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAAC 55573
||||| ||| | ||||| |||||||||||||| |||||||| |||||| |||||
Sbjct 14220119 ACCGCCAGCACGTCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAAC 14220060
Query 55574 ATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAG 55633
||||||| ||| || || || || ||||| | ||||| ||| | |||
Sbjct 14220059 ATCTACCAGCGTCGCGTGCTCGCCGGCGAGTTCCAGGTCGTCAACCCATGGCTCCTGAAG 14220000
Query 55634 GACCTGCAGAAGATCAACAAGTGGAACCCGCAGATCAAGA--CGGATATTGTGCGGAACG 55691
|||||| || | | |||| | | || |||| || || | || | |
Sbjct 14219999 GACCTGGTCGAGCTTGGCTTGTGGTCCGACAACATGAAGAACCGCATCATCGCCG--AGG 14219942
Query 55692 GGGGGTCCGTCCAGA--ATCTGGAG-ATTCCTCTGCGTCTCAAGGAGATTTACCGGACGG 55748
| || ||| |||||| ||| || || || | | |||| | ||| |||||
Sbjct 14219941 GCGGCTCCATCCAGAACATCGCCAGCATCCCCGAGGATACCAAGCGCCTGTACAAGACGG 14219882
Query 55749 TGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCG 55808
| |||||||| | ||| | | | | ||| ||||| || || || | |||||
Sbjct 14219881 TCTGGGAGATCTCGCAGCGCACCGTCGTCCAGATGGCGGCTGACCGCGGCGCCTTCATCG 14219822
Query 55809 ACCAGTCCCAGTCTCTGAACATCTTCATG-GAGAATCCTTCACTGGCCAAGTTGAGCTCG 55867
|||| || ||||| || |||||| |||| | || || || ||| |||| | | ||
Sbjct 14219821 ACCAATCGCAGTCGCTCAACATCCACATGCGCGAGCCCACCA-TGGGCAAGATAACGTCT 14219763
Query 55868 ATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGACCC 55925
|||||||| ||| |||||| || ||||||||||| |||||||| ||||| ||||
Sbjct 14219762 ATGCACTTCGCCGGCTGGAAGCTAGGCCTCAAGACGGGCATGTACTACCTGCGCACCC 14219705
Score = 93.3 bits (102), Expect = 5e-14
Identities = 235/348 (68%), Gaps = 16/348 (5%)
Strand=Plus/Plus
Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828
||||| || | ||||||||||| || || ||||| |||| ||||||||||||
Sbjct 7238479 GTTGATGAGAAGCCCCTTGATGTGACTACCATCGTGATCCTGATCGGCCATGATCATCAG 7238538
Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887
||||||| || ||| | | | ||| | |||| || || | || |||||||
Sbjct 7238539 GTGACCGTACCGTAGG-CTCTTGGTGTCGGTGTAGTGCTGCTTGTGCTTGAGACCGAGGA 7238597
Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947
|| ||||| ||| | |||| || | | | ||| | || | |||||||| |
Sbjct 7238598 ACTGTTTGATGTTCTGGATCTCCTTGTTCTTGAGGATCTGCTCGACGGGCGCATCCCGCA 7238657
Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG--CC--TACAACG 153003
| || || |||||| || || || || |||||| | ||| | ||| || ||| ||
Sbjct 7238658 CGTTCAGCATCTTTCCGCGTAGGGGGAAGACGCCG-ATGCGGTCCGGGTCCAGTACGGCG 7238716
Query 153004 CTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAG 153063
| |||| |||| ||| || || | |||||||||||||| || | ||||| || ||
Sbjct 7238717 C---GACCAGCAACAGCCAGACCTCTGGCCGAGTCACCCTCCGTCAGGATAAGGGTGCAC 7238773
Query 153064 TCGTGAGACCGATG---AGTACCGGCCCAGTTGGCGTCGTCAAGCTTG 153108
|||| | ||| || ||||| ||| ||||||| ||| | ||||||
Sbjct 7238774 TCGT--GGCCG-TGCCTGGTACCCGCCAAGTTGGCCTCGACCAGCTTG 7238818
>seq12
Length=9596913
Score = 107 bits (118), Expect = 2e-18
Identities = 291/435 (67%), Gaps = 14/435 (3%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || || |||||||| || ||||||||||| || ||| ||||||||||||||
Sbjct 6218252 TACTCGCCCACGCGCTTTTCGAAGAAGTTGGTCTTGCCGCCCAGAGAGATGTTCTCCATG 6218311
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGGC 74580
||||||| ||||| ||| | ||| | | | | | |||| | | ||| |||||
Sbjct 6218312 AAGTCGAAGGGGTTGGATGCGCGGTAGACCTTGTCAT-TCCCGAGA-GCAACCAGGAGGC 6218369
Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640
| || ||||| || | ||||||||| |||| || | |||||||| || |
Sbjct 6218370 GGTCTGCCACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCGAGCAGCGCAC 6218429
Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG--GACAATCTT 74698
| ||||| |||||||| | ||||| ||| | || | || ||| | || ||||
Sbjct 6218430 AAGGCAGGGCCTCGGTCAGGAACTCTTGCTCGATCTTGACAG--CATCGACGATGATCTC 6218487
Query 74699 GTGAATGTCTT--TGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAG-CGTCACGGCAAA 74755
| || || | | |||| || | ||| ||| ||| | || | || ||||||
Sbjct 6218488 CTCGATCATTTGCTTGCTGGGCCGGTT--CTTCATGTGGGAGAAGAGAAGGCA-GGCAAA 6218544
Query 74756 CTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCAT 74815
||| ||| || || || | || | || || || || | ||||||||||||
Sbjct 6218545 GTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTAAGGCCAGGCAT 6218604
Query 74816 AAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTC 74875
|| || |||||||||| ||| ||||||| |||| ||| ||||||||||| || ||
Sbjct 6218605 CAGGCCGCGCTTCTTCAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTC 6218664
Query 74876 GACACACGCAAAGGC 74890
|| ||||||||
Sbjct 6218665 AACGGCGGCAAAGGC 6218679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215452784000
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