Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq67 118 7e-22
seq23 93.3 3e-14
>seq67
Length=2709248
Score = 118 bits (130), Expect = 7e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||| ||||| ||||||||||| || ||||| ||||| || || || ||
Sbjct 458686 AGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGA 458745
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| || || || || || ||||| || ||||| || || ||||| || | ||||||
Sbjct 458746 CCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCC 458805
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| ||| || | || ||| | || |||||| ||| ||||||| ||
Sbjct 458806 TTGTCT-TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGT 458864
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | ||| || || || ||||||||
Sbjct 458865 GATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 91.5 bits (100), Expect = 9e-14
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||||||||||| || ||||| || || ||||| || || |||| || || ||
Sbjct 458929 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCCTCGAGCTGC 458988
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| ||||| || || | ||||| ||||| || || | ||||||||||| ||| ||
Sbjct 458989 TTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTC-CTGAATCTT 459047
Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | || ||||| |||||| |||| ||| || || || || ||
Sbjct 459048 CGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGT 459107
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || |||||||||||
Sbjct 459108 CAGGGTTTTGACGAAAATCTGCAT 459131
>seq23
Length=7462253
Score = 93.3 bits (102), Expect = 3e-14
Identities = 157/221 (71%), Gaps = 5/221 (2%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||| | || || ||||||||||| || ||||| || || || || || ||
Sbjct 7209988 AGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGG 7209929
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| || ||||| || | ||||| ||||| || || | ||||||
Sbjct 7209928 CCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGG-GGGATGCCCTCC 7209870
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGG 34666
||||| |||| || | || || | || ||||| ||| |||||| || | ||
Sbjct 7209869 TTGTCCTGGATC-TTGGACTTGACATTGTCGATCGTGTCGCTCG-ACTCCACCTCAAGGG 7209812
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| || || || || || | || |||||||| |||||||||
Sbjct 7209811 TGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 7209771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729293138640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |