Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq45 82.4 7e-11
>seq45
Length=5506958
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || || | |||||||| | || || || |||||||| || ||
Sbjct 4038513 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTGGGCGTCCCCTTCAACATCGCGAG 4038572
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||| | ||||| ||| ||||| |||| || | | | | || || ||| ||||
Sbjct 4038573 CTACTCGCTGCTGACGCACATGCTCGCCCACGCCTGCGACCTCGTGCCCGGGTCGCTG-- 4038630
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
| |||| |||| || || || ||||| | ||||| |||| || || | ||||
Sbjct 4038631 ACCCACGTCATGGGCGACGCCCACGTCTACGTCGACCACGTCGACGCCCTGCGCACCCAG 4038690
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCC 34839
|| | || |||||||| || |||||
Sbjct 4038691 CTCGAGCGCGAGCCCCGCCCCTTCCC 4038716
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565
||||| || |||||||| || | |||||| | || || |||| ||||| | ||||
Sbjct 4038716 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 4038657
Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAG 6623
| || || || |||| |||| | |||| ||| || || | | | | || |
Sbjct 4038656 ACGTGGGCGTCGCCCATGACGTGGGT--CAGCGACCCGGGCACGAGGTCGCAGGCGTGGG 4038599
Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683
||| ||||| ||| ||||| | ||| || || |||||||| || || || | |||||||
Sbjct 4038598 CGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGGCCCATGT 4038539
Query 6684 CTCCCGATCGTTGATAGAGCTGGCAG 6709
| | || || || ||||||||||||
Sbjct 4038538 CGCAGGACCGCTGGTAGAGCTGGCAG 4038513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448261951737600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |