Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq45 82.4 7e-11 >seq45 Length=5506958 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| | || || || |||||||| || || Sbjct 4038513 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTGGGCGTCCCCTTCAACATCGCGAG 4038572 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||| | ||||| ||| ||||| |||| || | | | | || || ||| |||| Sbjct 4038573 CTACTCGCTGCTGACGCACATGCTCGCCCACGCCTGCGACCTCGTGCCCGGGTCGCTG-- 4038630 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| || || || ||||| | ||||| |||| || || | |||| Sbjct 4038631 ACCCACGTCATGGGCGACGCCCACGTCTACGTCGACCACGTCGACGCCCTGCGCACCCAG 4038690 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCC 34839 || | || |||||||| || ||||| Sbjct 4038691 CTCGAGCGCGAGCCCCGCCCCTTCCC 4038716 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 6506 GGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTCAGGTAG 6565 ||||| || |||||||| || | |||||| | || || |||| ||||| | |||| Sbjct 4038716 GGGAAGGGGCGGGGCTCGCGCTCGAGCTGGGTGCGCAGGGCGTCGACGTGGTCGACGTAG 4038657 Query 6566 ATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGACATGAG 6623 | || || || |||| |||| | |||| ||| || || | | | | || | Sbjct 4038656 ACGTGGGCGTCGCCCATGACGTGGGT--CAGCGACCCGGGCACGAGGTCGCAGGCGTGGG 4038599 Query 6624 CGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGT 6683 ||| ||||| ||| ||||| | ||| || || |||||||| || || || | ||||||| Sbjct 4038598 CGAGCATGTGCGTCAGCAGCGAGTAGCTCGCGATGTTGAAGGGGACGCCCAGGCCCATGT 4038539 Query 6684 CTCCCGATCGTTGATAGAGCTGGCAG 6709 | | || || || |||||||||||| Sbjct 4038538 CGCAGGACCGCTGGTAGAGCTGGCAG 4038513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261951737600