Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq67 168 2e-36
seq23 141 2e-28
seq1 134 3e-26
>seq67
Length=2709248
Score = 168 bits (186), Expect = 2e-36
Identities = 158/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949
|| ||| || | ||||| ||||| || || ||||||||||||||||| || |||| ||
Sbjct 459135 TCCACGGAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAGAG 459194
Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009
||||| || || || || |||||||| |||||||| ||||| || ||||| ||||| |
Sbjct 459195 GGTCCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGAT 459254
Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||| ||||||||||||||||| || ||||| |||||||| || || || |||||
Sbjct 459255 TCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACCTC 459314
Query 211070 GAGAGTGATCGTCTTTCCCGT 211090
||| ||||| ||||| |||||
Sbjct 459315 GAGGGTGATGGTCTTGCCCGT 459335
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| ||||| ||||| || || ||||| || |||| | ||| | |||||
Sbjct 458464 AGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATCC 458523
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| |||||||| ||||| || ||||| ||||| | || ||||| |||
Sbjct 458524 TCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 458583
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || || || || ||| || ||||| ||||| ||
Sbjct 458584 TGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTT 458643
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || | ||||| || || | ||||||
Sbjct 458644 TTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 458675
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||| ||| || |||||||| || || | ||| |||| || ||
Sbjct 458920 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCGACCGTCC 458979
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| || ||||| ||||| | || |||||||||
Sbjct 458980 TCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 459039
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || || || ||||||||||| || || ||||| | ||||| |||
Sbjct 459040 TGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGTGATGGTC 459099
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| || || || || || | ||||||
Sbjct 459100 TTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Score = 131 bits (144), Expect = 4e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || | ||| || ||| ||| || |||||||| ||||||| || || | || ||
Sbjct 458692 AGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCC 458751
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| | ||||| || || || || | || ||||||||
Sbjct 458752 TCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCT 458811
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| |||||||| ||||| ||||| || || || || || ||||| |||
Sbjct 458812 TGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTC 458871
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 458872 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
>seq23
Length=7462253
Score = 141 bits (156), Expect = 2e-28
Identities = 162/215 (75%), Gaps = 7/215 (3%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| || |||||||| || || | || || | |||||
Sbjct 7209982 AGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCC 7209923
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||| ||||| || ||||| ||||| || |||||||| ||| ||| ||||||||
Sbjct 7209922 TCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGGGGATGCCCT-CCTTGTCC 7209864
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079
|||||||| || || || ||||| ||||| ||| || ||||| || |||||
Sbjct 7209863 TGGATCTTGGACTTGACATTGTCGATCGTGTC---GCTCGACTCCACCTCAAGGGTGATA 7209807
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| ||||| ||||| | ||||||
Sbjct 7209806 GTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 7209772
>seq1
Length=15654088
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || | || |||| ||||| || ||||||||||| ||||| ||
Sbjct 11956324 TTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATG 11956383
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || || ||||| ||||| | || ||||||||||||||||| ||||| || |||
Sbjct 11956384 AGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 11956443
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| ||| || ||||| |||||||| ||||| || || || ||||| || ||
Sbjct 11956444 ATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGAA 11956502
Score = 84.2 bits (92), Expect = 5e-11
Identities = 187/278 (67%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | |||| ||| ||||||||| |||||||| | ||
Sbjct 14220674 GTTCTTCTGGTTGCTCTTGCGGTTGCAG-TGG--TCTTTGTACAGCATGAAGGGGTTGCC 14220730
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||| | || ||| |||| ||| || ||| |||| || || || |||||
Sbjct 14220731 AGTCTCGGTCTGGGCCTCGAGGATGGCATACCACAGCTTTTGCGCCTTGAGCGTCTTGCG 14220790
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || ||| ||||||||||| ||| | ||||||| || || ||| ||
Sbjct 14220791 GCCCTTGCCCTCACGCTCGTACTTTTCGTACAAAGCCTCGAACTCGTCGCCGTAGCAGTC 14220850
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| || || || ||| |||||||| | ||| |||| | |||| | || || ||
Sbjct 14220851 TGCTAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCG 14220910
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
|||||||| ||||| | | |||| | ||| |||||
Sbjct 14220911 CTTCATGAATAGGTCTGGGATCCATAGGGCCAGGAAAA 14220948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150811869200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |