Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq67 98.7 7e-16
>seq67
Length=2709248
Score = 98.7 bits (108), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || || ||||| || || || ||||| || ||||| || || |
Sbjct 458903 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTGGAAGTCGAGTCATCA 458844
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || ||| ||||| || ||| | || || |||||
Sbjct 458843 GACACGATCGACAACGTGAAGTCGAAGATTCAAGACAAGGAGGGTATCCCCCCGGATCAG 458784
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||||| || ||||| ||||| || ||||| |||| |||||| | |||||||||
Sbjct 458783 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGACGGTCGCACTCTGTCGGATTACAAC 458724
Query 23791 ATACAAAAAGAG 23802
|| || || |||
Sbjct 458723 ATCCAGAAGGAG 458712
Score = 89.7 bits (98), Expect = 3e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| ||||| || || ||||| | || || || || ||
Sbjct 459131 ATGCAGATTTTCGTCAAAACCCTGACGGGCAAGACCATCACCTTGGAGGTGGAGTCTTCG 459072
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || ||| | || || || ||
Sbjct 459071 GACACCATCGACAATGTCAAGTC-GAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 459013
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || ||||| || || || || |||| || ||| | ||| |||||
Sbjct 459012 GCAGCGCCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGTCGGACTCTTTCCGACTACAA 458953
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 458952 CATCCAGAAGGAG 458940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009270440640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |