Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 3e-17
>seq1
Length=15654088
Score = 104 bits (114), Expect = 3e-17
Identities = 271/413 (66%), Gaps = 8/413 (2%)
Strand=Plus/Plus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|||||||| || || |||||||| | | |||||| || | | || ||| || |||||
Sbjct 14220858 CCAGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACCCGCTTCATG 14220917
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
|| || || || |||||||| || | || || || |||| | || || || ||
Sbjct 14220918 AATAGGTCTGGGATCCATAGGGCCAGGAAAAGGTCGCGGGCGCGGATCTCCTCCTTGCCG 14220977
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || ||||| ||||| | | || | ||||| || || ||||| ||
Sbjct 14220978 TGGTTCTTGCGCAGGTCGAGGAACTCGAACACGTCGGCGTGCCACGGCTCCAGATAGATG 14221037
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | || || || || || || ||||| || | || | ||| ||||| || ||
Sbjct 14221038 GCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGGCCGTGTTGTTGAAA 14221097
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| || | || ||||| ||||| || || || || | || || ||
Sbjct 14221098 ACACGTAGCATGGGCACGATGCCGTTGGATGTGCCGTTGGTGCCGGCGATGTAGGAGCCC 14221157
Query 78255 CTTGCGCGAATATTACTAATGGATATC----CCTATTCCTCCTGCCATCTTAGATATTAG 78310
| ||||| || ||||||| || || || || |||||||| || || |
Sbjct 14221158 GTGGCGCGGATGCGG----TGGATATTGAGGCCGATACCGCCGGCCATCTTGGAGATCAT 14221213
Query 78311 AGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
|| || ||| | || ||||||||||| || || ||||| ||| ||||||
Sbjct 14221214 GGCACAGGTTTTGAGGGTGTCGTAGATACCATCGATGCTGTCGTCCTTCATGT 14221266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668105331200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |