Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017- 06-19] 80 sequences; 53,151,282 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq67 111 4e-19 seq23 95.1 3e-14 >seq67 Length=2709248 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||| || ||||||||||| |||| | ||| | Sbjct 458913 GAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTCCG 458972 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || |||||||||||||| || | ||||||||| | | ||| || || Sbjct 458973 ACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTC 459032 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || |||||| | || | | |||| ||| ||| || || | || Sbjct 459033 CTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCCAAGGT 459092 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||| || || || ||||| | |||||| Sbjct 459093 GATGGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || |||||||||||||||||||| || | | || | Sbjct 459141 GAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGAGAGGGTCCG 459200 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||| | | |||||| || Sbjct 459201 GCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGGGATTCCCTC 459260 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| | || | | | || ||| ||| || || || || Sbjct 459261 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCACCTCGAGGGT 459320 Query 152066 AATAGTTTTGCCCGT 152080 || || |||||||| Sbjct 459321 GATGGTCTTGCCCGT 459335 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || ||||| ||||| || || |||||||| || | || || | ||||| Sbjct 458464 AGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGACAAGGTACGGCCATCC 458523 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| || | ||||||||||| | ||| || ||||| || Sbjct 458524 TCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 458583 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || || | || | | || || || ||||| || || || ||| Sbjct 458584 TGGATCTTGCTCTTTACGTTATCAATCGTATCGGATGATTCGACTTCGAGCGTGATGGTT 458643 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | ||||||||||||| |||||| Sbjct 458644 TTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 458675 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || |||||||||||||| | | ||| | || || || || || || || || Sbjct 458712 CTCCTTCTGGATGTTGTAATCCGACAGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAA 458771 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| | | ||||| |||| | ||| || ||||| |||||||| || || || | Sbjct 458772 GATCAAACGTTGCTGATCCGGGGGGATACCCTCCTTGTCTTGAATCTTCGACTTCACGTT 458831 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | ||||||| ||| ||||| || || || || ||||| ||||| ||||| || Sbjct 458832 GTCGATCGTGTCTGATGACTCGACTTCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGAC 458891 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 458892 GAAGATCTGCAT 458903 >seq23 Length=7462253 Score = 95.1 bits (104), Expect = 3e-14 Identities = 137/192 (71%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || ||||||||||| |||| | || | ||||| || || ||| || || || Sbjct 7209962 CTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAA 7209903 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | ||| || ||||| || || || || |||||| | Sbjct 7209902 GATCAGGCGCTGCTGGTCAGGGG-GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 7209844 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| ||| || ||||| || ||||| ||||||||||| |||||||| Sbjct 7209843 GTCGATCGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 7209784 Query 152093 GAAGACCTGCAT 152104 |||| |||||| Sbjct 7209783 AAAGATCTGCAT 7209772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819617333680