Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gaeumannomyces_20sp._20JS-464_20[genbank_20GCA_5F002197995.1_202017-
06-19] 80 sequences; 53,151,282 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq67 176 9e-39
seq23 174 3e-38
seq1 125 1e-23
>seq67
Length=2709248
Score = 176 bits (194), Expect = 9e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| ||||| ||||| |||| || | ||||| || || ||||||||||| || |
Sbjct 458677 CCACCGCGCAGACGAAGCACCAAGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCCGAC 458736
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| || ||||| || || || || ||||||||||||||||| || || ||
Sbjct 458737 AGAGTGCGACCGTCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGCTGATCCGGGGGG 458796
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||||||||| ||||| | || ||| | ||||| ||||| || | ||||||
Sbjct 458797 ATACCCTCCTTGTCTTGAATCTTCGACTTCACGTTGTCGATCGTGTCTGATGACTCGACT 458856
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 458857 TCCAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 458903
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| ||||| || || || || | ||||| || || |||||||||||||| |
Sbjct 458904 ACCGCCACGGAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 458963
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || ||||| || || |||||||| ||||||| || || ||||| ||
Sbjct 458964 AAGAGTCCGACCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGG 459023
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| || ||||| | || || | ||||| |||||||||| || ||
Sbjct 459024 GATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCCGAAGACTCCAC 459083
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| ||||||| || || ||||| ||||||||
Sbjct 459084 CTCCAAGGTGATGGTCTTGCCCGTCAGGGTTTTGACGAAAATCTGCAT 459131
Score = 150 bits (166), Expect = 4e-31
Identities = 174/229 (76%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| |||||||| || || || || || | || || || || ||||||||||| | |
Sbjct 458449 CCGCCACGCAGACGCAGCACTAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCCGAC 458508
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || || || ||||||| || || ||||| ||
Sbjct 458509 AAG-GTACGGCCATCCTCCAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCCGGAGG 458567
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| |||||||| || |||||| ||||| |||||| |||| || || || || | |||||
Sbjct 458568 GATGCCCTCCTTATCCTGGATC-TTGCTCTTTACGTTATCAATCGTATCGGATGATTCGA 458626
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||| ||||| || || || ||||| ||||| ||||| ||||||||
Sbjct 458627 CTTCGAGCGTGATGGTTTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 458675
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| ||||| || || || || | ||| |||||||||||||||||||| |
Sbjct 459132 ACCTCCACGGAGGCGGAGGACGAGGTGCAGCGTCGACTCTTTTTGGATGTTGTAGTCCGA 459191
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| ||||| || || || ||||| | || || ||||| ||
Sbjct 459192 GAGGGTCCGGCCGTCCTCGAGTTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGAGG 459251
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||| || || |||| || ||
Sbjct 459252 GATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGGAAGACTCCAC 459311
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077
||||| ||||| ||||| |||||||
Sbjct 459312 CTCGAGGGTGATGGTCTTGCCCGTCA 459337
>seq23
Length=7462253
Score = 174 bits (192), Expect = 3e-38
Identities = 176/228 (77%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || |||| |||||| || || |||||||||||||| |
Sbjct 7209998 ACCACCACGCAGACGCAGCACTAGGTGTAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGA 7209939
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||||||||||||||| || ||||| || |||||||||| || || |||||| ||
Sbjct 7209938 CAGCGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAGGCGCTGCTGGTCA-GGGG 7209880
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| ||||| | || ||
Sbjct 7209879 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCGCTCGACTCCAC 7209820
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| ||||| | ||||| || || ||||||||
Sbjct 7209819 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 7209772
>seq1
Length=15654088
Score = 125 bits (138), Expect = 1e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || || ||||||||||| || || || || || || ||
Sbjct 11956324 TTCTGGATGTTGTAGTCGGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCGAAAATG 11956383
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || || ||||||||||| |||||||| | || || | |||
Sbjct 11956384 AGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 11956443
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || |||||||| ||||| || || | ||||| |||||
Sbjct 11956444 ATCGTGTCCGAGGACTCGACCTCCAGAGTGATGGTCTTGCCAGTAAGGGTCTTCACGAA 11956502
Score = 89.7 bits (98), Expect = 1e-12
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726
|| ||||| |||| ||||| | |||| | || ||||||||| || ||||| |
Sbjct 6001767 ACACCACCCTCGAACTTCTTCAAGGCCTTGGACAGGGCACCGAGCGAGTCACGGTCAAGG 6001826
Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785
||||||||||||| ||||| ||||| | |||||| | |||||| |||| |||| |||
Sbjct 6001827 TAGTTGGTCGGCTCGTCAAGGACGATCAGGTGGGGACGCTGCCAT-GAGCAGGCGGCGAG 6001885
Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833
|| | ||| | || ||||| ||||| ||||| ||||| || ||
Sbjct 6001886 GACAACCTTGACACGCTGACCACCGGACAGACCACGCATGCGCGAGTG 6001933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738127092320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |